Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 2.4e-131 472.2 247 100.0
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 6.7e-118 427.6 247 93.1
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 1.4e-78 297.0 250 68.0
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 1.4e-59 233.8 275 55.6
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 3.2e-59 232.6 251 54.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 4.3e-56 222.2 262 51.5
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.6e-55 220.3 250 50.8
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 5.8e-53 211.8 256 48.4
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.1e-51 205.7 245 50.2
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.5e-50 202.6 249 51.0
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 6.0e-50 201.8 259 49.4
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 6.0e-50 201.8 245 47.8
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 6.0e-50 201.8 246 48.8
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.0e-49 201.1 244 48.0
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 3.0e-49 199.5 235 48.9
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.6e-49 198.0 244 47.1
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 8.6e-49 198.0 252 48.4
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 4.3e-48 195.7 248 47.2
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.3e-48 195.7 245 46.1
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 2.1e-47 193.4 244 47.1
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.4e-45 185.7 244 45.5
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.3e-44 184.1 260 44.2
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.9e-44 183.0 250 44.0
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 3.8e-44 182.6 244 45.1
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 3.8e-44 182.6 242 46.3
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 4.6e-42 175.6 255 44.7
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.9e-40 170.2 258 46.1
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 9.6e-40 167.9 257 40.9
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 3.4e-37 159.5 234 44.4
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 3.4e-37 159.5 260 43.1
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 4.4e-37 159.1 260 43.5
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 4.4e-37 159.1 256 43.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 3.8e-36 156.0 256 39.8
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 4.9e-36 155.6 247 40.1
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 8.4e-36 154.8 254 40.2
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.9e-35 153.7 245 40.8
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.3e-35 151.4 258 39.1
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 1.2e-34 151.0 232 40.9
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 2.7e-34 149.8 249 41.0
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.0e-33 147.9 241 41.1
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 3.9e-33 146.0 243 40.7
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 4.3e-32 142.5 279 36.9
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 2.8e-31 139.8 246 39.0
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 1.8e-30 137.1 252 37.7
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.5e-29 134.0 265 36.2
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 3.4e-29 132.9 261 34.1
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 4.5e-29 132.5 261 34.1
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 7.6e-29 131.7 273 34.4
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 2.4e-27 126.7 253 34.4
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 4.2e-27 125.9 253 34.4
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 9.3e-27 124.8 276 34.1
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 1.2e-26 124.4 246 33.3
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.7e-26 123.2 254 33.1
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.7e-26 123.2 254 33.9
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 3.5e-26 122.9 253 39.5
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 4.6e-26 122.5 255 32.9
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 6.0e-26 122.1 238 36.6
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 7.9e-26 121.7 241 38.2
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 2.3e-25 120.2 242 37.2
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 3.0e-25 119.8 247 34.0
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 5.1e-25 119.0 251 33.5
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 8.7e-25 118.2 285 34.0
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 7.4e-24 115.2 240 35.8
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 7.4e-24 115.2 249 35.7
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 9.6e-24 114.8 242 35.1
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.1e-23 113.6 260 33.5
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.1e-22 109.8 260 33.8
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 3.1e-22 109.8 250 36.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 3.1e-22 109.8 179 39.7
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 4.0e-22 109.4 255 32.9
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 4.0e-22 109.4 245 31.8
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 4.0e-22 109.4 256 32.0
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 2.0e-21 107.1 244 34.0
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 2.6e-21 106.7 93 59.1
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.4e-21 106.3 242 31.8
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.6e-21 105.1 138 44.9
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 2.2e-20 103.6 261 38.3
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 3.8e-20 102.8 253 30.4
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 3.8e-20 102.8 243 31.3
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 6.5e-20 102.1 275 30.2
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.1e-18 97.1 252 30.2
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 4.6e-18 95.9 204 38.7
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 6.0e-18 95.5 256 32.0
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.3e-17 94.4 236 31.8
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.9e-17 92.8 177 36.2
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 3.9e-17 92.8 245 30.2
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 1.9e-16 90.5 263 29.3
Zm00001eb065580 Zea mays HOM05D007097 ORTHO05D008131 5.7e-16 89.0 263 31.2
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 9.6e-16 88.2 260 29.6
Zm00001eb434190 Zea mays HOM05D007097 ORTHO05D008131 9.6e-16 88.2 249 31.3
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 1.6e-15 87.4 241 34.0
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 8.2e-15 85.1 229 30.6
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 1.8e-14 84.0 251 29.1
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.8e-14 84.0 239 28.5
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 5.9e-13 79.0 249 29.3
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.7e-12 77.4 252 27.8
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 2.1e-10 70.5 81 45.7
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 2.7e-10 70.1 90 44.4
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.5e-08 64.3 94 42.6
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.7e-08 61.6 66 47.0
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 9.7e-08 61.6 94 39.4
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.8e-07 60.1 95 36.8
EL10Ac7g16802 Beta vulgaris HOM05D007097 ORTHO05D008131 6.3e-07 58.9 249 28.9
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.1e-06 56.6 87 34.5
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 3.1e-06 56.6 250 24.4


User provided reference genes

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