Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019927 Carpinus fangiana HOM05D002312 ORTHO05D121324 2.8e-24 114.4 55 100.0
CBR_g41138 Chara braunii HOM05D002312 ORTHO05D007981 2.6e-06 54.7 31 74.2
CSS0000547 Camellia sinensis var. sinensis HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
Cfa019434 Carpinus fangiana HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
Cre13.g562150 Chlamydomonas reinhardtii HOM05D002312 ORTHO05D007981 3.4e-06 54.3 33 72.7
ECA240G2934 Erigeron canadensis HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
HanXRQChr03g0078111 Helianthus annuus HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
Nitab4.5_0009317g0020 Nicotiana tabacum HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
Psat4g169960 Pisum sativum HOM05D002312 ORTHO05D007981 3.4e-06 54.3 28 82.1
Actinidia07349 Actinidia chinensis HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
ATR0763G215 Amborella trichopoda HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Aqoxy1G01461 Aquilegia oxysepala HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
AL1G64300 Arabidopsis lyrata HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
AT1G56050 Arabidopsis thaliana HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
arahy.Tifrunner.gnm1.ann1.9G4NA9 Arachis hypogaea HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
arahy.Tifrunner.gnm1.ann1.PK5V4W Arachis hypogaea HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
EL10Ac1g00206 Beta vulgaris HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
BcaB02g10786 Brassica carinata HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
BcaC08g44232 Brassica carinata HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
A05p17160 Brassica napus HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
CANSAT80G0083 Cannabis sativa HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
CAN.G943.35 Capsicum annuum HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
CARHR045770 Cardamine hirsuta HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
CiPaw.12G006300 Carya illinoinensis HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
AUR62040884 Chenopodium quinoa HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
DCAR_013741 Daucus carota HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Dinv42513 Davidia involucrata HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Eucgr.F03180 Eucalyptus grandis HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Thhalv10011519m.g Eutrema salsugineum HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Hma1.2p1_0637F.1_g193560 Hydrangea macrophylla HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Lsat_1_v5_gn_9_45640 Lactuca sativa HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Lalb_Chr01g0007181 Lupinus albus HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
MBI02_g07511_MAGBIO Magnolia biondii HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
MD10G1202000 Malus domestica HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Peaxi162Scf00452g00847 Petunia axillaris HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Pp3c6_25660 Physcomitrium patens HOM05D002312 ORTHO05D007981 4.5e-06 53.9 31 74.2
PGR031G3731 Punica granatum HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
QL04p073898 Quercus lobata HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Rhsim06G0238600 Rhododendron simsii HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Sp1g41660 Schrenkiella parvula HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Solyc07g066430.3 Solanum lycopersicum HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Sopen07g034600 Solanum pennellii HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
PGSC0003DMG402022236 Solanum tuberosum HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
THA.LOC104810259 Tarenaya hassleriana HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
TPR.G9402 Trifolium pratense HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
TAR626G1371 Trochodendron aralioides HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
GSVIVG01020436001 Vitis vinifera HOM05D002312 ORTHO05D007981 4.5e-06 53.9 28 82.1
Ca_27307_v3 Cicer arietinum L. HOM05D002312 ORTHO05D007981 5.9e-06 53.5 28 82.1
PSO541G3034 Papaver somniferum HOM05D002312 ORTHO05D007981 5.9e-06 53.5 28 82.1
SEGI_24789 Sequoiadendron giganteum HOM05D002312 ORTHO05D007981 5.9e-06 53.5 28 82.1
Atru.chr12.2173 Acer truncatum HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
CDE01G0809 Ceratophyllum demersum HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Duzib187G0190 Durio zibethinus HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
FvH4_3g15830 Fragaria vesca HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
FAN11G0457 Fragaria x ananassa HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
FAN16G1092 Fragaria x ananassa HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
FAN21G2661 Fragaria x ananassa HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Glyma.08G236400 Glycine max HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Gohir.A04G051032 Gossypium hirsutum HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Gohir.D05G330100 Gossypium hirsutum HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Gorai.009G353700 Gossypium raimondii HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Lj3g0013391 Lotus japonicus HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Manes.06G171400 Manihot esculenta HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Phvul.011G174800 Phaseolus vulgaris HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Potri.001G457900 Populus trichocarpa HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
RcHm_v2.0_Chr5g0026631 Rosa chinensis HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
SGA_v2.0_scaffold713G53502 Striga asiatica HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 78.6
Thecc.07G153200 Theobroma cacao HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
TWI38G0315 Tripterygium wilfordii HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
HPP92_015923 Vanilla planifolia HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
VMungo1127G0254 Vigna mungo HOM05D002312 ORTHO05D007981 7.7e-06 53.1 28 82.1
Aa31sc167G70 Aethionema arabicum HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 82.1
MSTRG.13062 Avicennia marina HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
ClCG11G016400 Citrullus lanatus HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
Cc05_g16040 Coffea canephora HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 82.1
MELO3C010569.2 Cucumis melo HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
CsaV3_4G031850 Cucumis sativus L. HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
Migut.H01695 Erythranthe guttata HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
Lj1C905T5 Lonicera japonica HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
Mapoly0084s0078 Marchantia polymorpha HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
Sed0019011 Sechium edule HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6
SMO367G0264 Selaginella moellendorffii HOM05D002312 ORTHO05D007981 1.0e-05 52.8 32 68.8
unitig_744.g24502 Utricularia gibba HOM05D002312 ORTHO05D007981 1.0e-05 52.8 28 78.6


User provided reference genes

Program Settings