Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.2e-33 146.0 75 100.0
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.1e-28 129.4 75 89.3
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 8.8e-21 103.2 70 75.7
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.9e-17 90.5 75 64.0
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 3.8e-16 87.8 70 67.1
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 9.4e-15 83.2 77 66.2
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 6.1e-14 80.5 75 58.7
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.0e-14 80.1 79 60.8
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.3e-13 78.6 75 53.3
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.0e-13 78.2 75 61.3
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 6.8e-13 77.0 80 57.5
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 6.8e-13 77.0 80 57.5
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 2.0e-12 75.5 72 56.9
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.0e-12 75.5 79 58.2
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 9.7e-12 73.2 65 64.6
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.8e-11 71.6 75 56.0
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.8e-11 70.9 75 56.0
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.8e-11 70.9 75 56.0
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 1.8e-10 68.9 76 55.3
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 4.1e-10 67.8 75 52.0
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 9.1e-10 66.6 53 64.2
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.2e-09 66.2 61 62.3
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.6e-09 65.9 61 60.7
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 3.5e-09 64.7 66 54.5
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.5e-09 64.7 58 60.3
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 3.5e-09 64.7 66 51.5
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 5.9e-09 63.9 68 55.9
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 5.9e-09 63.9 57 57.9
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 1.0e-08 63.2 66 56.1
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 1.3e-08 62.8 69 47.8
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 1.7e-08 62.4 64 51.6
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 5.0e-08 60.8 54 64.8
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 5.0e-08 60.8 54 64.8
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.9e-07 58.9 77 49.4
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 3.2e-07 58.2 67 53.7
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 4.2e-07 57.8 78 51.3
Migut.I00449 Erythranthe guttata HOM05D008114 ORTHO05D010089 4.2e-07 57.8 53 54.7
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 4.2e-07 57.8 64 50.0
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 5.5e-07 57.4 67 44.8
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 7.2e-07 57.0 55 54.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 7.2e-07 57.0 55 54.5
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 7.2e-07 57.0 57 54.4
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 9.4e-07 56.6 58 55.2
Nitab4.5_0000694g0130 Nicotiana tabacum HOM05D040682 ORTHO05D010089 1.2e-06 56.2 66 50.0
Ciclev10023125m.g Citrus clementina HOM05D008114 ORTHO05D010089 1.6e-06 55.8 70 45.7
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 2.1e-06 55.5 47 53.2
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 6.1e-06 53.9 56 53.6
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 6.1e-06 53.9 76 47.4


User provided reference genes

Program Settings