Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.4e-63 246.1 124 100.0
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.4e-63 246.1 124 100.0
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.8e-58 229.2 124 95.2
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 2.0e-38 162.5 134 67.2
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 1.1e-36 156.8 121 67.8
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 1.9e-36 156.0 121 67.8
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 2.5e-36 155.6 99 79.8
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.1e-35 152.5 133 63.2
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 3.6e-35 151.8 130 64.6
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 6.1e-35 151.0 129 65.1
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 7.9e-35 150.6 99 76.8
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 7.9e-35 150.6 133 62.4
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 7.9e-35 150.6 132 63.6
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.8e-34 149.4 97 75.3
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.8e-34 149.4 99 74.7
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 2.3e-34 149.1 136 58.8
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.3e-34 149.1 134 61.9
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 2.3e-34 149.1 123 64.2
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 6.7e-34 147.5 97 75.3
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.7e-34 147.5 134 61.2
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 6.7e-34 147.5 86 81.4
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 8.8e-34 147.1 137 59.9
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 8.8e-34 147.1 110 67.3
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 1.1e-33 146.7 135 60.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 2.6e-33 145.6 133 58.6
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 4.4e-33 144.8 99 75.8
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 4.4e-33 144.8 96 76.0
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 5.7e-33 144.4 134 60.4
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 7.4e-33 144.1 134 59.7
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 9.7e-33 143.7 109 68.8
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 1.3e-32 143.3 105 68.6
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.8e-32 142.1 110 70.9
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 2.8e-32 142.1 128 60.9
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 3.7e-32 141.7 75 86.7
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 3.7e-32 141.7 125 61.6
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 4.8e-32 141.4 136 60.3
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 8.2e-32 140.6 84 72.6
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 8.2e-32 140.6 126 61.1
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 1.4e-31 139.8 110 67.3
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 1.4e-31 139.8 97 73.2
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 1.8e-31 139.4 129 60.5
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.8e-31 139.4 118 64.4
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 1.8e-31 139.4 102 69.6
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 2.4e-31 139.0 101 69.3
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 2.4e-31 139.0 99 66.7
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 4.1e-31 138.3 101 66.3
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 4.1e-31 138.3 78 80.8
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 4.1e-31 138.3 130 58.5
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 5.3e-31 137.9 101 66.3
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 7.0e-31 137.5 101 66.3
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 7.0e-31 137.5 110 61.8
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 7.0e-31 137.5 101 66.3
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 7.0e-31 137.5 118 63.6
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 9.1e-31 137.1 100 66.0
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 9.1e-31 137.1 103 67.0
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 1.2e-30 136.7 127 55.9
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.6e-30 136.3 101 64.4
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 1.6e-30 136.3 101 63.4
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.6e-30 136.3 101 64.4
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 1.6e-30 136.3 101 63.4
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.6e-30 136.3 130 56.9
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.6e-30 136.3 125 63.2
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.6e-30 136.3 110 64.5
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 2.0e-30 136.0 94 68.1
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 2.0e-30 136.0 103 66.0
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 2.0e-30 136.0 96 70.8
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 2.6e-30 135.6 101 64.4
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 2.6e-30 135.6 75 82.7
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.6e-30 135.6 130 60.8
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 3.5e-30 135.2 100 65.0
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 4.5e-30 134.8 78 76.9
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 5.9e-30 134.4 151 52.3
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 7.7e-30 134.0 74 85.1
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 1.7e-29 132.9 122 59.0
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 2.2e-29 132.5 128 54.7
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 2.9e-29 132.1 126 58.7
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 3.8e-29 131.7 124 58.1
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 6.5e-29 131.0 136 55.9
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 8.5e-29 130.6 131 54.2
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 8.5e-29 130.6 76 80.3
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.1e-28 130.2 80 77.5
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 1.5e-28 129.8 127 55.9
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 1.9e-28 129.4 131 54.2
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 2.5e-28 129.0 76 78.9
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 2.5e-28 129.0 97 62.9
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 3.2e-28 128.6 126 57.1
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.2e-28 128.6 134 56.0
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 3.2e-28 128.6 70 82.9
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 4.2e-28 128.3 87 73.6
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.6e-27 125.2 127 57.5
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.0e-26 121.7 65 87.7
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 1.1e-25 120.2 75 72.0
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 2.2e-24 115.9 75 68.0
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 4.8e-24 114.8 73 68.5
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 8.2e-24 114.0 112 58.9
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.4e-23 113.2 71 77.5
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 1.7e-21 106.3 76 60.5
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 5.0e-21 104.8 62 74.2
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 2.5e-20 102.4 72 55.6
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 2.5e-20 102.4 56 82.1
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.5e-20 102.4 95 61.1
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.0e-18 97.1 70 60.0
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 3.0e-18 95.5 121 43.0
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 2.0e-17 92.8 88 59.1
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 2.6e-17 92.4 64 60.9
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.7e-16 89.7 87 58.6
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 6.3e-16 87.8 70 50.0
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 5.5e-12 74.7 88 51.1
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 4.7e-11 71.6 39 79.5
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.8e-10 69.7 87 48.3
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.6e-09 65.9 37 78.4
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 4.9e-08 61.6 35 82.9
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 4.1e-07 58.5 40 65.0
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.2e-06 57.0 42 61.9
Gohir.D09G100550 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.5e-06 55.1 43 60.5


User provided reference genes

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