Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 1.6e-143 512.7 256 100.0
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 4.8e-119 431.4 245 85.7
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 6.9e-118 427.6 253 83.4
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.6e-106 388.7 251 74.1
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.8e-105 386.3 251 73.7
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.0e-104 382.9 251 72.9
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.1e-102 375.6 257 72.8
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.1e-102 375.6 257 72.8
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 6.5e-100 367.9 250 73.2
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.2e-99 365.5 251 73.7
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 7.2e-99 364.4 252 72.6
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 9.4e-99 364.0 252 73.4
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.6e-98 363.2 249 72.7
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 2.1e-98 362.8 251 72.5
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 3.6e-98 362.1 245 70.6
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 3.6e-98 362.1 249 72.7
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 8.0e-98 360.9 254 71.3
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.0e-97 360.5 249 72.7
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.0e-97 358.6 247 72.5
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 4.0e-97 358.6 244 70.9
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 4.0e-97 358.6 253 70.8
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 8.8e-97 357.5 245 71.0
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.0e-96 356.3 247 72.1
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 4.4e-96 355.1 253 70.4
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 4.4e-96 355.1 244 70.9
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 1.3e-95 353.6 255 70.2
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.2e-95 352.8 248 70.2
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.8e-95 352.4 255 69.8
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 3.7e-95 352.1 249 69.5
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 4.8e-95 351.7 250 70.4
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 8.3e-95 350.9 245 69.0
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.8e-94 349.7 250 70.0
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 2.4e-94 349.4 253 68.4
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 4.1e-94 348.6 228 72.8
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.0e-92 344.0 233 75.5
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.0e-92 344.0 253 65.6
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 2.3e-92 342.8 245 69.4
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 2.9e-92 342.4 245 69.8
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 5.0e-92 341.7 245 69.0
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 5.0e-92 341.7 248 69.0
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 6.6e-92 341.3 258 65.5
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 8.6e-92 340.9 240 70.4
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.5e-91 340.1 256 66.4
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.5e-91 340.1 256 66.4
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.5e-91 340.1 256 68.8
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.3e-91 339.0 247 69.6
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 4.2e-91 338.6 245 69.0
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.2e-91 338.6 288 62.2
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 7.2e-91 337.8 253 65.6
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 7.2e-91 337.8 253 66.0
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 9.5e-91 337.4 253 66.4
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.6e-90 336.7 248 69.0
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 2.1e-90 336.3 245 68.6
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 2.8e-90 335.9 253 67.2
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 6.1e-90 334.7 254 65.0
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 8.0e-90 334.3 245 68.2
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 1.0e-89 334.0 244 68.0
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 4.0e-89 332.0 247 68.8
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 5.2e-89 331.6 255 66.7
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 6.8e-89 331.3 246 67.5
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.5e-88 330.1 247 67.2
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 2.0e-88 329.7 250 66.4
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 2.0e-88 329.7 238 71.4
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 2.6e-88 329.3 248 64.5
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 7.5e-88 327.8 255 65.5
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 3.7e-87 325.5 247 65.6
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 1.4e-86 323.6 243 65.8
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 7.0e-86 321.2 242 65.3
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 7.0e-86 321.2 251 64.1
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 7.0e-86 321.2 243 65.0
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.2e-85 320.5 243 65.4
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.6e-85 320.1 251 64.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.6e-85 320.1 251 64.1
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 2.0e-85 319.7 251 63.7
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.0e-85 319.7 251 64.1
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 2.0e-85 319.7 251 63.7
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 2.7e-85 319.3 240 66.7
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 4.5e-85 318.5 243 65.0
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 4.5e-85 318.5 251 63.3
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 4.5e-85 318.5 251 63.7
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.9e-85 318.2 235 66.0
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 1.3e-84 317.0 251 62.5
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.9e-84 315.8 243 64.6
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.9e-84 315.8 243 64.6
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 2.9e-84 315.8 240 64.6
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 8.6e-84 314.3 243 63.8
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 8.6e-84 314.3 235 64.7
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 6.1e-82 308.1 196 76.0
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 3.0e-81 305.8 218 69.7
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.8e-81 304.7 233 65.7
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.8e-81 304.7 258 61.6
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 4.9e-79 298.5 252 63.1
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 8.3e-79 297.7 230 66.5
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.1e-78 297.4 247 62.8
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 1.1e-78 297.4 252 60.7
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 1.4e-78 297.0 235 62.6
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 2.7e-77 292.7 252 59.1
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.8e-77 291.2 258 60.9
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 1.7e-76 290.0 257 61.1
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 3.9e-76 288.9 257 60.3
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 1.6e-74 283.5 236 62.3
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.1e-74 283.1 189 77.2
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 3.6e-74 282.3 243 61.3
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.7e-74 282.0 242 61.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 4.7e-74 282.0 319 50.8
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 3.7e-71 272.3 197 68.5
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.4e-70 269.6 247 59.5
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 3.2e-70 269.2 251 57.8
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 4.1e-70 268.9 186 71.0
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.0e-68 264.2 210 66.2
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 1.9e-67 260.0 240 52.9
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 2.1e-61 240.0 237 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 6.6e-60 235.0 231 49.8
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 4.0e-57 225.7 163 67.5
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.2e-57 225.3 194 60.8
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.4e-54 217.2 159 62.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 1.7e-52 210.3 220 48.6
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.8e-50 203.0 138 74.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.8e-50 203.0 236 43.2
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 8.1e-50 201.4 134 75.4
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 2.1e-42 176.8 130 65.4
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 2.5e-30 136.7 229 33.6
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 5.1e-28 129.0 205 34.6
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.8e-25 120.6 85 67.1
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.7e-23 114.0 84 64.3
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.8e-20 104.0 78 64.1
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 1.8e-20 104.0 78 64.1
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.8e-20 104.0 82 59.8
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 5.5e-14 82.4 58 62.1
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.1e-13 80.5 65 72.3
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 2.2e-07 60.5 47 57.4
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 1.4e-06 57.8 46 54.3
Pp3c15_21980 Physcomitrium patens HOM05D002209 ORTHO05D312687 5.5e-06 55.8 38 65.8


User provided reference genes

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