Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 9.0e-96 353.6 181 100.0
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 1.8e-88 329.3 174 96.6
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 5.2e-59 231.5 175 72.6
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 1.1e-56 223.8 164 75.0
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 2.4e-56 222.6 169 71.0
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 4.5e-55 218.4 167 70.1
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 2.2e-54 216.1 183 66.1
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 1.5e-53 213.4 170 67.6
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 3.2e-53 212.2 169 68.0
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 5.5e-53 211.5 178 67.4
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 1.2e-52 210.3 168 67.9
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 8.0e-52 207.6 158 69.6
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 5.2e-51 204.9 173 65.9
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 1.2e-50 203.8 180 60.6
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 3.4e-50 202.2 171 66.1
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 6.3e-49 198.0 140 71.4
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 6.3e-49 198.0 140 72.1
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 6.3e-49 198.0 166 62.7
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 8.3e-49 197.6 137 75.9
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 8.3e-49 197.6 166 63.9
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.1e-48 197.2 140 70.7
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.8e-48 196.4 166 63.9
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 4.1e-48 195.3 171 63.2
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 5.4e-48 194.9 165 60.0
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.6e-47 193.4 175 61.1
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.7e-47 192.6 166 62.7
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 5.9e-47 191.4 166 63.3
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 1.3e-46 190.3 166 62.7
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 1.7e-46 189.9 175 60.0
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 1.9e-45 186.4 143 67.1
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 2.5e-45 186.0 156 62.2
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 2.8e-44 182.6 142 65.5
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 5.2e-43 178.3 138 65.9
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 7.5e-42 174.5 140 67.1
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.3e-33 147.1 140 53.6
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 2.9e-33 146.0 139 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 4.9e-33 145.2 135 52.6
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 4.9e-33 145.2 137 53.3
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.1e-32 144.1 168 47.0
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 3.2e-32 142.5 135 50.4
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 4.6e-31 138.7 156 49.4
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 1.7e-30 136.7 139 50.4
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 2.3e-30 136.3 136 54.4
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 4.0e-27 125.6 88 65.9
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 4.9e-25 118.6 89 68.5
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.0e-22 110.9 134 45.5
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 6.8e-19 98.2 80 65.0
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 2.9e-17 92.8 53 81.1
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 2.1e-15 86.7 69 65.2
RcHm_v2.0_Chr5g0030641 Rosa chinensis HOM05D008293 ORTHO05D010504 1.4e-11 73.9 67 56.7
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 9.3e-08 61.2 82 42.7


User provided reference genes

Program Settings