Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019516 Carpinus fangiana HOM05D004700 ORTHO05D005576 1.1e-112 410.2 241 100.0
Haze_09248 Corylus avellana HOM05D004700 ORTHO05D005576 4.3e-109 398.3 241 97.1
Prupe.4G156500 Prunus persica HOM05D004700 ORTHO05D005576 9.2e-96 354.0 241 87.1
QL08p024163 Quercus lobata HOM05D004700 ORTHO05D005576 2.3e-94 349.4 241 85.9
CiPaw.12G110800 Carya illinoinensis HOM05D004700 ORTHO05D005576 1.1e-93 347.1 240 87.5
CiPaw.11G155900 Carya illinoinensis HOM05D004700 ORTHO05D005576 4.3e-93 345.1 240 88.8
Manes.15G098600 Manihot esculenta HOM05D004700 ORTHO05D005576 1.6e-92 343.2 240 82.1
Lj1A824T63 Lonicera japonica HOM05D004700 ORTHO05D005576 2.8e-92 342.4 243 83.5
Ciclev10016084m.g Citrus clementina HOM05D004700 ORTHO05D005576 2.3e-91 339.3 241 85.5
Potri.011G104500 Populus trichocarpa HOM05D004700 ORTHO05D005576 6.8e-91 337.8 241 84.2
Actinidia03618 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.7e-89 333.2 243 85.6
Sabra11G0076400 Salix brachista HOM05D004700 ORTHO05D005576 2.2e-89 332.8 242 83.9
Atru.chr2.1968 Acer truncatum HOM05D004700 ORTHO05D005576 4.9e-89 331.6 241 84.2
Sabra11G0081100 Salix brachista HOM05D004700 ORTHO05D005576 6.4e-89 331.3 241 83.8
Atru.chr2.1937 Acer truncatum HOM05D004700 ORTHO05D005576 1.4e-88 330.1 241 83.8
CSS0048020 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 1.2e-87 327.0 241 84.2
Cc05_g10710 Coffea canephora HOM05D004700 ORTHO05D005576 3.5e-87 325.5 246 84.1
CSS0037390 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 4.6e-87 325.1 241 83.8
Nn6g34422 Nelumbo nucifera HOM05D004700 ORTHO05D005576 1.3e-86 323.6 241 79.3
Phvul.011G168700 Phaseolus vulgaris HOM05D004700 ORTHO05D005576 1.3e-86 323.6 241 70.5
GSVIVG01014096001 Vitis vinifera HOM05D004700 ORTHO05D005576 1.3e-86 323.6 242 83.9
MELO3C016116.2 Cucumis melo HOM05D004700 ORTHO05D005576 2.3e-86 322.8 242 79.3
Actinidia12604 Actinidia chinensis HOM05D004700 ORTHO05D005576 6.6e-86 321.2 256 76.2
COL.COLO4_17473 Corchorus olitorius HOM05D004700 ORTHO05D005576 6.6e-86 321.2 232 71.6
Lalb_Chr19g0133711 Lupinus albus HOM05D004700 ORTHO05D005576 6.6e-86 321.2 243 70.4
Eucgr.F03234 Eucalyptus grandis HOM05D004700 ORTHO05D005576 8.6e-86 320.9 241 82.6
vmacro11972 Vaccinium macrocarpon HOM05D004700 ORTHO05D005576 1.1e-85 320.5 242 83.1
Glyma.15G209600 Glycine max HOM05D004700 ORTHO05D005576 1.9e-85 319.7 241 75.9
VMungo1127G0687 Vigna mungo HOM05D004700 ORTHO05D005576 3.3e-85 318.9 241 70.1
CSS0040857 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 9.5e-85 317.4 240 81.7
TWI38G0400 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 2.8e-84 315.8 243 78.6
Solyc08g015770.4 Solanum lycopersicum HOM05D004700 ORTHO05D005576 8.1e-84 314.3 243 80.2
Nitab4.5_0000092g0360 Nicotiana tabacum HOM05D004700 ORTHO05D005576 1.8e-83 313.2 244 68.4
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 3.1e-83 312.4 248 80.2
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 5.2e-83 311.6 242 78.1
CANSAT56G3173 Cannabis sativa HOM05D004700 ORTHO05D005576 8.9e-83 310.8 245 66.1
THA.LOC104822577 Tarenaya hassleriana HOM05D004700 ORTHO05D005576 8.9e-83 310.8 243 67.9
TPR.G16482 Trifolium pratense HOM05D004700 ORTHO05D005576 1.2e-82 310.5 241 68.5
CAN.G68.2 Capsicum annuum HOM05D004700 ORTHO05D005576 2.6e-82 309.3 243 79.4
MD03G1247600 Malus domestica HOM05D004700 ORTHO05D005576 3.4e-82 308.9 242 78.5
Cpa.g.sc77.62 Carica papaya HOM05D004700 ORTHO05D005576 4.4e-82 308.5 232 70.3
Glyma.09G099300 Glycine max HOM05D004700 ORTHO05D005576 1.7e-81 306.6 241 79.7
Medtr8g054400 Medicago truncatula HOM05D004700 ORTHO05D005576 1.7e-81 306.6 236 69.5
Thecc.07G132900 Theobroma cacao HOM05D004700 ORTHO05D005576 1.7e-81 306.6 242 81.4
ClCG07G010130 Citrullus lanatus HOM05D004700 ORTHO05D005576 6.4e-81 304.7 254 63.8
Gorai.007G331800 Gossypium raimondii HOM05D004700 ORTHO05D005576 6.4e-81 304.7 243 65.8
Manes.03G079300 Manihot esculenta HOM05D004700 ORTHO05D005576 8.4e-81 304.3 241 80.9
EL10Ac4g08417 Beta vulgaris HOM05D004700 ORTHO05D005576 1.1e-80 303.9 239 77.8
DCAR_013348 Daucus carota HOM05D004700 ORTHO05D005576 1.1e-80 303.9 247 79.4
Oeu050672.1 Olea europaea HOM05D004700 ORTHO05D005576 1.4e-80 303.5 243 75.3
PGR031G0266 Punica granatum HOM05D004700 ORTHO05D005576 1.4e-80 303.5 240 80.4
TAR624G0400 Trochodendron aralioides HOM05D004700 ORTHO05D005576 2.4e-80 302.8 241 79.7
Lj3g0009226 Lotus japonicus HOM05D004700 ORTHO05D005576 3.2e-80 302.4 242 71.1
RhsimUnG0206700 Rhododendron simsii HOM05D004700 ORTHO05D005576 5.4e-80 301.6 266 72.6
Sed0011117 Sechium edule HOM05D004700 ORTHO05D005576 7.1e-80 301.2 240 77.1
PGSC0003DMG400013718 Solanum tuberosum HOM05D004700 ORTHO05D005576 9.2e-80 300.8 232 81.0
Duzib213G0278 Durio zibethinus HOM05D004700 ORTHO05D005576 1.2e-79 300.4 242 81.0
AL1G62040 Arabidopsis lyrata HOM05D004700 ORTHO05D005576 2.1e-79 299.7 244 68.0
CsaV3_4G008200 Cucumis sativus L. HOM05D004700 ORTHO05D005576 2.1e-79 299.7 241 77.6
AT1G53490 Arabidopsis thaliana HOM05D004700 ORTHO05D005576 4.6e-79 298.5 244 68.0
Sc03g0010710 Simmondsia chinensis HOM05D004700 ORTHO05D005576 7.8e-79 297.7 243 79.0
Peaxi162Scf00111g01325 Petunia axillaris HOM05D004700 ORTHO05D005576 1.3e-78 297.0 247 65.2
Sp1g40020 Schrenkiella parvula HOM05D004700 ORTHO05D005576 1.7e-78 296.6 244 68.0
Thhalv10011691m.g Eutrema salsugineum HOM05D004700 ORTHO05D005576 2.3e-78 296.2 244 68.0
MD11G1269900 Malus domestica HOM05D004700 ORTHO05D005576 3.0e-78 295.8 228 76.8
AUR62039578 Chenopodium quinoa HOM05D004700 ORTHO05D005576 3.9e-78 295.4 230 78.7
AUR62019650 Chenopodium quinoa HOM05D004700 ORTHO05D005576 6.6e-78 294.7 230 78.7
Carub.0001s4267 Capsella rubella HOM05D004700 ORTHO05D005576 8.6e-78 294.3 244 66.8
Nitab4.5_0012258g0020 Nicotiana tabacum HOM05D004700 ORTHO05D005576 8.6e-78 294.3 242 78.5
Potri.001G383900 Populus trichocarpa HOM05D004700 ORTHO05D005576 8.6e-78 294.3 247 77.3
Migut.H02024 Erythranthe guttata HOM05D004700 ORTHO05D005576 1.5e-77 293.5 245 67.8
Nitab4.5_0000348g0050 Nicotiana tabacum HOM05D004700 ORTHO05D005576 2.5e-77 292.7 244 77.9
Hund08843 Selenicereus undatus HOM05D004700 ORTHO05D005576 5.6e-77 291.6 243 76.5
TWI38G0408 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 5.6e-77 291.6 242 66.9
Sopen08g005940 Solanum pennellii HOM05D004700 ORTHO05D005576 1.2e-76 290.4 243 77.8
Actinidia39420 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.1e-76 289.7 230 73.9
Aa31LG10G1720 Aethionema arabicum HOM05D004700 ORTHO05D005576 8.1e-76 287.7 245 69.0
ECA236G3615 Erigeron canadensis HOM05D004700 ORTHO05D005576 2.4e-75 286.2 265 60.4
BolC3t21472H Brassica oleracea HOM05D004700 ORTHO05D005576 3.1e-75 285.8 246 63.4
C03p91550 Brassica napus HOM05D004700 ORTHO05D005576 4.0e-75 285.4 246 63.8
BcaC01g01394 Brassica carinata HOM05D004700 ORTHO05D005576 6.8e-75 284.6 245 63.3
CDE06G2539 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 2.0e-74 283.1 244 74.6
MBI06_g08516_MAGBIO Magnolia biondii HOM05D004700 ORTHO05D005576 2.0e-74 283.1 250 73.2
HanXRQChr15g0492381 Helianthus annuus HOM05D004700 ORTHO05D005576 3.4e-74 282.3 251 72.9
Rhsim06G0211800 Rhododendron simsii HOM05D004700 ORTHO05D005576 3.4e-74 282.3 247 78.1
Gohir.D11G302900 Gossypium hirsutum HOM05D004700 ORTHO05D005576 4.4e-74 282.0 243 63.4
Sabra16G0252900 Salix brachista HOM05D004700 ORTHO05D005576 5.8e-74 281.6 248 75.0
Gohir.A11G289500 Gossypium hirsutum HOM05D004700 ORTHO05D005576 1.3e-73 280.4 243 63.0
PSO541G3766 Papaver somniferum HOM05D004700 ORTHO05D005576 1.3e-73 280.4 241 73.0
MSTRG.12860 Avicennia marina HOM05D004700 ORTHO05D005576 1.7e-73 280.0 237 62.4
DCAR_021040 Daucus carota HOM05D004700 ORTHO05D005576 1.9e-72 276.6 240 76.2
CARHR043720 Cardamine hirsuta HOM05D004700 ORTHO05D005576 2.4e-72 276.2 246 64.6
BcaC08g43535 Brassica carinata HOM05D004700 ORTHO05D005576 3.2e-72 275.8 256 69.1
PSO675G6346 Papaver somniferum HOM05D004700 ORTHO05D005576 2.7e-71 272.7 243 72.8
A05p18220 Brassica napus HOM05D004700 ORTHO05D005576 3.9e-70 268.9 245 60.4
SGA_v2.0_scaffold181G39765 Striga asiatica HOM05D004700 ORTHO05D005576 5.1e-70 268.5 247 71.7
Peaxi162Scf00000g00759 Petunia axillaris HOM05D004700 ORTHO05D005576 8.7e-70 267.7 233 76.8
Os02g0232100 Oryza sativa ssp. japonica HOM05D004700 ORTHO05D005576 1.1e-69 267.3 243 64.6
Ca_22302_v3 Cicer arietinum L. HOM05D004700 ORTHO05D005576 2.5e-69 266.2 240 62.1
Ah.04g164030 Amaranthus hybridus HOM05D004700 ORTHO05D005576 7.3e-69 264.6 230 72.6
BcaB07g33326 Brassica carinata HOM05D004700 ORTHO05D005576 1.1e-67 260.8 246 58.9
ATR0602G050 Amborella trichopoda HOM05D004700 ORTHO05D005576 1.4e-67 260.4 256 68.4
Dinv26707 Davidia involucrata HOM05D004700 ORTHO05D005576 1.4e-67 260.4 241 73.9
FAN11G3801 Fragaria x ananassa HOM05D004700 ORTHO05D005576 1.4e-67 260.4 254 67.7
BcaB02g10917 Brassica carinata HOM05D004700 ORTHO05D005576 1.8e-67 260.0 248 68.5
Ah.06g187700 Amaranthus hybridus HOM05D004700 ORTHO05D005576 2.4e-67 259.6 232 74.6
A06p00990 Brassica napus HOM05D004700 ORTHO05D005576 1.5e-66 256.9 248 64.9
BraA06t23327Z Brassica rapa HOM05D004700 ORTHO05D005576 1.5e-66 256.9 248 64.9
FAN16G2451 Fragaria x ananassa HOM05D004700 ORTHO05D005576 2.0e-66 256.5 254 66.9
Lsat_1_v5_gn_7_101801 Lactuca sativa HOM05D004700 ORTHO05D005576 3.4e-66 255.8 255 58.0
RcHm_v2.0_Chr5g0029521 Rosa chinensis HOM05D004700 ORTHO05D005576 1.2e-63 247.3 241 70.1
Zm00001eb239370 Zea mays HOM05D004700 ORTHO05D005576 1.6e-63 246.9 242 56.6
BcaC08g44093 Brassica carinata HOM05D004700 ORTHO05D005576 7.9e-63 244.6 242 57.9
Psat4g157000 Pisum sativum HOM05D004700 ORTHO05D005576 7.9e-63 244.6 241 60.2
FvH4_3g17740 Fragaria vesca HOM05D004700 ORTHO05D005576 3.0e-62 242.7 241 70.5
unitig_746.g26835 Utricularia gibba HOM05D004700 ORTHO05D005576 8.7e-62 241.1 245 56.3
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea HOM05D004700 ORTHO05D005576 4.3e-61 238.8 224 73.2
FAN25G1946 Fragaria x ananassa HOM05D004700 ORTHO05D005576 1.3e-60 237.3 243 68.3
BraA08t32208Z Brassica rapa HOM05D004700 ORTHO05D005576 2.8e-60 236.1 246 54.9
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea HOM05D004700 ORTHO05D005576 4.8e-60 235.3 233 70.0
C06p09250 Brassica napus HOM05D004700 ORTHO05D005576 8.1e-60 234.6 234 66.7
BolC6t36002H Brassica oleracea HOM05D004700 ORTHO05D005576 8.1e-60 234.6 234 66.7
C06p14980 Brassica napus HOM05D004700 ORTHO05D005576 1.4e-59 233.8 234 57.3
BolC6t36675H Brassica oleracea HOM05D004700 ORTHO05D005576 1.4e-59 233.8 234 57.3
BraA08t32205Z Brassica rapa HOM05D004700 ORTHO05D005576 3.8e-57 225.7 243 53.1
Oeu010032.1 Olea europaea HOM05D004700 ORTHO05D005576 4.6e-55 218.8 222 54.1
BcaB04g17077 Brassica carinata HOM05D004700 ORTHO05D005576 5.8e-50 201.8 229 52.0
Aqoxy1G01902 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 6.0e-47 191.8 150 85.3
Sed0005766 Sechium edule HOM05D004700 ORTHO05D005576 3.0e-46 189.5 150 86.0
Sabra11G0075500 Salix brachista HOM05D004700 ORTHO05D005576 6.7e-46 188.3 149 86.6
Sabra11G0075300 Salix brachista HOM05D004700 ORTHO05D005576 2.5e-45 186.4 161 63.4
CDE02G3773 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 1.3e-38 164.1 140 60.7
SEGI_00597 Sequoiadendron giganteum HOM05D004700 ORTHO05D005576 3.9e-38 162.5 246 43.1
Sc07g0002390 Simmondsia chinensis HOM05D004700 ORTHO05D005576 3.3e-37 159.5 132 81.1
Gorai.002G047100 Gossypium raimondii HOM05D004700 ORTHO05D005576 1.3e-36 157.5 179 65.9
Gohir.D01G038350 Gossypium hirsutum HOM05D004700 ORTHO05D005576 5.3e-35 152.1 156 73.1
Actinidia04620 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.6e-34 149.8 166 51.2
Sabra11G0075900 Salix brachista HOM05D004700 ORTHO05D005576 2.5e-32 143.3 151 76.8
Sabra11G0076300 Salix brachista HOM05D004700 ORTHO05D005576 2.5e-32 143.3 156 55.1
Dinv13363 Davidia involucrata HOM05D004700 ORTHO05D005576 1.8e-30 137.1 126 86.5
Aqoxy1G01901 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 6.3e-28 128.6 90 70.0
BraA05t20718Z Brassica rapa HOM05D004700 ORTHO05D005576 1.7e-25 120.6 72 81.9
Nitab4.5_0000244g0440 Nicotiana tabacum HOM05D000856 ORTHO05D001792 4.5e-18 95.9 83 65.1
Zm00001eb364990 Zea mays HOM05D001185 ORTHO05D005576 1.3e-17 94.4 130 42.3
Mapoly0001s0250 Marchantia polymorpha HOM05D004700 ORTHO05D005576 2.2e-17 93.6 261 42.5
Sc07g0002380 Simmondsia chinensis HOM05D004700 ORTHO05D005576 1.2e-13 81.3 101 48.5
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis HOM05D004700 ORTHO05D005576 2.4e-11 73.6 231 43.3
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 5.9e-10 68.9 46 71.7
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 1.0e-09 68.2 46 71.7
Pp3c8_15890 Physcomitrium patens HOM05D004700 ORTHO05D005576 5.0e-09 65.9 262 26.7


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