Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019503 Carpinus fangiana HOM05D010270 ORTHO05D011987 3.7e-93 344.7 162 100.0
Cfa018854 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.3e-77 293.1 162 84.6
Cfa021219 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.1e-63 246.9 162 74.1
Cfa018804 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.8e-58 229.6 166 69.3
Haze_07207 Corylus avellana HOM05D001885 ORTHO05D011987 2.1e-56 222.6 162 66.7
Cfa018855 Carpinus fangiana HOM05D010270 ORTHO05D011987 3.9e-50 201.8 154 66.9
Cfa018803 Carpinus fangiana HOM05D001885 ORTHO05D011987 8.7e-50 200.7 159 64.8
Cfa018807 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.1e-47 193.7 170 61.2
Haze_07206 Corylus avellana HOM05D001885 ORTHO05D011987 9.0e-47 190.7 159 64.2
Cfa018805 Carpinus fangiana HOM05D010270 ORTHO05D011987 2.0e-46 189.5 162 61.7
Cfa018822 Carpinus fangiana HOM05D010270 ORTHO05D011987 5.9e-46 188.0 163 63.2
Cfa021186 Carpinus fangiana HOM05D010270 ORTHO05D011987 2.2e-37 159.5 162 53.1
Cfa002569 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.4e-34 150.2 162 52.5
Haze_24798 Corylus avellana HOM05D010270 ORTHO05D011987 7.4e-33 144.4 164 50.0
Haze_04524 Corylus avellana HOM05D010270 ORTHO05D011987 4.5e-30 135.2 171 49.1
Cfa016802 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.7e-29 133.3 134 52.2
Haze_24795 Corylus avellana HOM05D010270 ORTHO05D011987 4.7e-27 125.2 137 51.1
Cfa002570 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.4e-26 123.6 150 50.7
Cfa018802 Carpinus fangiana HOM05D001885 ORTHO05D011987 2.0e-25 119.8 138 47.1
Haze_24797 Corylus avellana HOM05D010270 ORTHO05D011987 2.2e-24 116.3 132 47.0
Haze_24793 Corylus avellana HOM05D010270 ORTHO05D011987 5.0e-21 105.1 159 39.0
Cfa005738 Carpinus fangiana HOM05D010270 ORTHO05D011987 1.7e-16 90.1 136 37.5
Haze_24801 Corylus avellana HOM05D000091 ORTHO05D003024 2.0e-14 83.2 156 37.8
Haze_07159 Corylus avellana HOM05D058322 ORTHO05D011987 1.0e-10 70.9 151 34.4
Haze_07204 Corylus avellana HOM05D013094 ORTHO05D034216 2.6e-09 66.2 93 38.7
Haze_07202 Corylus avellana HOM05D013094 ORTHO05D034181 5.7e-09 65.1 103 36.9
Solyc12g098460.2 Solanum lycopersicum HOM05D000466 ORTHO05D023017 9.8e-09 64.3 108 32.4
Haze_09263 Corylus avellana HOM05D041252 ORTHO05D034223 2.8e-08 62.8 122 32.0
Cfa018814 Carpinus fangiana HOM05D013094 ORTHO05D034216 4.9e-08 62.0 88 38.6
PSO170G0937 Papaver somniferum HOM05D000466 ORTHO05D000331 4.9e-08 62.0 120 31.7
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.9e-08 62.0 109 35.8
Cfa014685 Carpinus fangiana HOM05D054272 ORTHO05D043773 8.3e-08 61.2 121 38.0
Haze_09262 Corylus avellana HOM05D041252 ORTHO05D034223 8.3e-08 61.2 78 46.2
Cfa018811 Carpinus fangiana HOM05D013094 ORTHO05D011987 1.1e-07 60.8 106 34.0
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-07 60.5 109 35.8
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.8e-07 60.1 90 36.7
Atru.chr2.66 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-07 59.7 119 31.9
TAR636G3181 Trochodendron aralioides HOM05D000466 ORTHO05D000331 2.4e-07 59.7 119 29.4
Haze_07200 Corylus avellana HOM05D013094 ORTHO05D034181 5.4e-07 58.5 107 34.6
Haze_07201 Corylus avellana HOM05D013094 ORTHO05D164593 9.2e-07 57.8 102 35.3
Gohir.A08G012601 Gossypium hirsutum HOM05D000466 ORTHO05D000331 9.2e-07 57.8 122 31.1
Gohir.D08G023066 Gossypium hirsutum HOM05D000466 ORTHO05D000331 9.2e-07 57.8 122 31.1
Gohir.D12G173400 Gossypium hirsutum HOM05D000466 ORTHO05D000331 9.2e-07 57.8 121 31.4
Gorai.004G018300 Gossypium raimondii HOM05D000466 ORTHO05D000331 9.2e-07 57.8 122 31.1
Gorai.008G185900 Gossypium raimondii HOM05D000466 ORTHO05D000331 9.2e-07 57.8 121 31.4
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-06 57.4 96 38.5
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-06 57.4 96 38.5
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.2e-06 57.4 96 38.5
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-06 57.4 113 33.6
Haze_18868 Corylus avellana HOM05D013094 ORTHO05D034216 1.6e-06 57.0 83 41.0
Duzib150G1362 Durio zibethinus HOM05D000466 ORTHO05D000331 2.0e-06 56.6 126 28.6
vmacro10531 Vaccinium macrocarpon HOM05D000466 ORTHO05D000331 2.0e-06 56.6 115 33.0
CSS0034576 Camellia sinensis var. sinensis HOM05D000466 ORTHO05D000331 2.7e-06 56.2 112 32.1
CiPaw.14G129100 Carya illinoinensis HOM05D000466 ORTHO05D000331 2.7e-06 56.2 129 31.8
Gohir.A12G170100 Gossypium hirsutum HOM05D000466 ORTHO05D000331 3.5e-06 55.8 121 30.6
Os11g0156000 Oryza sativa ssp. japonica HOM05D000466 ORTHO05D000331 4.5e-06 55.5 114 31.6
CARHR142220 Cardamine hirsuta HOM05D000466 ORTHO05D000331 5.9e-06 55.1 106 29.2
COL.COLO4_07873 Corchorus olitorius HOM05D000466 ORTHO05D000331 5.9e-06 55.1 123 30.1
Lsat_1_v5_gn_1_78300 Lactuca sativa HOM05D000466 ORTHO05D000331 5.9e-06 55.1 82 35.4
PSO135G1002 Papaver somniferum HOM05D000466 ORTHO05D000331 5.9e-06 55.1 116 32.8
Sc04g0006680 Simmondsia chinensis HOM05D000466 ORTHO05D000331 5.9e-06 55.1 111 30.6
AL181U10040 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 7.7e-06 54.7 106 29.2
AL4G46330 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 7.7e-06 54.7 106 29.2
BcaB01g03197 Brassica carinata HOM05D000466 ORTHO05D000331 7.7e-06 54.7 104 30.8
Carub.0004s2959 Capsella rubella HOM05D000466 ORTHO05D000331 7.7e-06 54.7 106 29.2
Duzib251G0472 Durio zibethinus HOM05D000466 ORTHO05D000331 7.7e-06 54.7 121 28.9
Thhalv10001555m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 7.7e-06 54.7 108 28.7
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-06 54.7 118 34.7


User provided reference genes

Program Settings