Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 6.5e-69 263.8 126 100.0
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.5e-65 252.7 126 95.2
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 3.7e-56 221.5 126 81.7
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 2.9e-53 211.8 125 79.2
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 5.6e-52 207.6 125 77.6
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 1.6e-51 206.1 125 76.0
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 2.8e-51 205.3 122 77.9
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 3.6e-51 204.9 125 76.0
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.7e-51 204.5 124 76.6
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 4.7e-51 204.5 124 76.6
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.0e-50 203.4 124 75.8
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 1.8e-50 202.6 124 75.8
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.8e-50 202.6 125 74.4
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 1.2e-49 199.9 124 75.0
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 74.2
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 77.4
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 77.4
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.3e-48 196.4 124 74.2
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 1.7e-48 196.1 126 74.6
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 4.9e-48 194.5 124 72.6
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 4.9e-48 194.5 124 75.8
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 6.4e-48 194.1 125 74.4
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 8.3e-48 193.7 125 72.0
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 1.1e-47 193.4 127 73.2
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 1.9e-47 192.6 127 73.2
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 4.1e-47 191.4 124 71.0
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 4.1e-47 191.4 125 72.0
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 7.0e-47 190.7 127 72.4
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 7.0e-47 190.7 126 74.6
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 9.2e-47 190.3 124 72.6
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 2.7e-46 188.7 123 74.0
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.7e-46 188.7 123 74.8
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 3.5e-46 188.3 124 72.6
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.5e-46 188.3 124 72.6
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.5e-46 188.3 124 72.6
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 4.6e-46 188.0 124 71.8
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 4.6e-46 188.0 123 69.9
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 72.6
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 1.7e-45 186.0 125 69.6
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 5.0e-45 184.5 125 72.0
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 6.6e-45 184.1 132 65.2
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 6.6e-45 184.1 127 69.3
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 6.6e-45 184.1 122 73.0
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.6e-45 184.1 125 69.6
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 8.6e-45 183.7 125 71.2
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 68.8
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.3e-44 181.8 125 68.0
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 3.3e-44 181.8 125 66.4
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 3.3e-44 181.8 125 68.8
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 4.3e-44 181.4 122 71.3
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 5.6e-44 181.0 126 70.6
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 5.6e-44 181.0 125 68.0
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.6e-43 179.5 122 69.7
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 1.6e-43 179.5 126 69.0
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.1e-43 179.1 125 66.4
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 2.8e-43 178.7 122 68.0
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 2.8e-43 178.7 125 65.6
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.6e-43 178.3 126 68.3
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 3.6e-43 178.3 125 68.0
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.4e-42 176.4 125 67.2
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 1.8e-42 176.0 120 70.0
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 2.3e-42 175.6 127 71.7
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 3.1e-42 175.3 122 65.6
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 3.1e-42 175.3 127 67.7
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 125 65.6
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 4.0e-42 174.9 118 67.8
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 6.8e-42 174.1 126 65.1
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 6.8e-42 174.1 125 66.4
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 8.9e-42 173.7 127 67.7
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 8.9e-42 173.7 122 68.9
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 8.9e-42 173.7 125 64.8
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 1.2e-41 173.3 127 65.4
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.2e-41 173.3 126 66.7
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 1.5e-41 172.9 124 67.7
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.5e-41 172.9 122 66.4
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 2.0e-41 172.6 126 65.1
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 2.0e-41 172.6 122 67.2
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.0e-41 172.6 125 66.4
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 2.6e-41 172.2 125 64.0
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.6e-41 172.2 122 68.9
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 3.4e-41 171.8 124 66.9
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 4.4e-41 171.4 126 65.1
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 4.4e-41 171.4 126 65.1
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 5.8e-41 171.0 126 64.3
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 5.8e-41 171.0 126 64.3
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 7.5e-41 170.6 126 67.5
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 7.5e-41 170.6 124 65.3
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 1.3e-40 169.9 126 64.3
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.7e-40 169.5 127 64.6
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 6.4e-40 167.5 126 63.5
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 8.3e-40 167.2 123 65.0
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.1e-39 166.8 124 63.7
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 1.9e-39 166.0 120 67.5
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.4e-39 165.6 119 67.2
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 3.2e-39 165.2 126 62.7
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 3.2e-39 165.2 126 62.7
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 5.4e-39 164.5 103 74.8
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 7.1e-39 164.1 121 62.8
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 1.2e-38 163.3 125 65.6
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 3.5e-38 161.8 128 60.2
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.6e-38 161.4 124 66.1
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 4.6e-38 161.4 126 61.9
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 6.0e-38 161.0 126 61.1
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 7.8e-38 160.6 125 60.8
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 1.0e-37 160.2 126 60.3
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.0e-37 158.7 125 60.0
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 5.1e-37 157.9 127 58.3
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 6.6e-37 157.5 126 61.9
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.6e-37 157.5 125 59.2
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 6.4e-32 141.0 128 54.7
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.1e-31 140.2 125 56.0
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.4e-31 139.8 97 63.9
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.2e-30 136.7 125 55.2
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 3.6e-27 125.2 80 71.2
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 1.1e-26 123.6 94 66.0
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.8e-26 122.9 77 71.4
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 7.6e-25 117.5 81 64.2
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 7.6e-25 117.5 125 48.8
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 4.9e-24 114.8 125 50.4
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 6.6e-21 104.4 113 47.8
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 9.6e-20 100.5 113 46.9
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.1e-18 97.1 66 63.6
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 1.4e-18 96.7 72 66.7
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 3.1e-18 95.5 116 44.8
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 4.0e-18 95.1 67 64.2
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.0e-17 92.8 68 60.3
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 9.9e-17 90.5 114 43.0
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 9.3e-15 84.0 121 37.2
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 3.5e-14 82.0 69 56.5
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 1.3e-13 80.1 78 47.4
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 1.1e-12 77.0 51 74.5
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 2.8e-11 72.4 75 45.3
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 1.1e-10 70.5 87 41.4
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 7.6e-09 64.3 113 32.7
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 9.9e-09 63.9 62 38.7
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 1.7e-08 63.2 124 33.9
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 3.2e-07 58.9 66 43.9


User provided reference genes

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