Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 3.0e-72 275.0 132 100.0
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.5e-55 218.8 134 82.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.2e-52 209.9 132 78.0
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.2e-25 120.2 135 49.6
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 7.4e-23 110.9 128 46.9
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 5.3e-21 104.8 134 43.3
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.2e-20 103.6 126 44.4
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 1.0e-19 100.5 134 41.8
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 3.8e-19 98.6 133 44.4
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 5.0e-19 98.2 131 44.3
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 1.9e-18 96.3 128 46.1
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 2.5e-18 95.9 133 42.1
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 1.6e-17 93.2 130 40.8
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 1.6e-17 93.2 137 40.9
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 8.8e-16 87.4 132 40.2
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 2.6e-15 85.9 130 40.0
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 2.2e-14 82.8 130 37.7
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 2.2e-14 82.8 130 37.7
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.7e-14 82.0 130 38.5
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 3.7e-14 82.0 132 38.6
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 8.2e-14 80.9 132 36.4
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 4.1e-13 78.6 129 38.8
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.6e-12 76.6 131 38.9
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.6e-12 75.9 122 44.3
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 2.6e-12 75.9 118 39.0
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 1.0e-11 73.9 117 41.0
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 3.8e-11 72.0 121 38.8
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 5.0e-11 71.6 132 36.4
Medtr3g076950 Medicago truncatula HOM05D010415 ORTHO05D013002 7.2e-10 67.8 117 37.6
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 7.2e-10 67.8 107 43.0
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 9.4e-10 67.4 133 39.8
Potri.012G085901 Populus trichocarpa HOM05D008921 ORTHO05D010506 1.2e-09 67.0 131 31.3
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 2.1e-09 66.2 120 34.2
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 3.6e-09 65.5 134 36.6
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 6.1e-09 64.7 117 33.3
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 8.0e-09 64.3 131 35.9
QL10p006881 Quercus lobata HOM05D008921 ORTHO05D010506 1.0e-08 63.9 145 31.0
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 1.4e-08 63.5 129 37.2
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.0e-08 62.4 102 38.2
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 3.0e-08 62.4 118 34.7
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 6.7e-08 61.2 131 37.4
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 6.7e-08 61.2 120 33.3
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 1.5e-07 60.1 131 35.9
Potri.015G084101 Populus trichocarpa HOM05D008921 ORTHO05D010506 2.6e-07 59.3 53 49.1
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 1.7e-06 56.6 134 34.3
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 1.7e-06 56.6 130 33.8
Nitab4.5_0001793g0030 Nicotiana tabacum HOM05D016190 ORTHO05D017486 2.8e-06 55.8 130 33.8
arahy.Tifrunner.gnm1.ann1.TC1G7F Arachis hypogaea HOM05D010415 ORTHO05D013002 8.2e-06 54.3 113 31.9


User provided reference genes

Program Settings