Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 6.1e-97 357.5 178 100.0
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 4.1e-93 344.7 178 96.1
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 1.6e-73 279.6 178 77.5
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 1.6e-73 279.6 180 75.6
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 1.0e-67 260.4 182 69.2
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 5.2e-64 248.1 181 68.0
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 8.4e-62 240.7 181 63.5
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 1.5e-55 219.9 179 61.5
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 3.3e-50 202.2 191 52.9
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 2.1e-44 183.0 134 67.9
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 6.5e-38 161.4 135 57.0
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 3.1e-32 142.5 158 46.8
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 3.0e-27 125.9 72 81.9
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 4.2e-21 105.5 74 66.2
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 6.1e-20 101.7 125 42.4
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 1.7e-17 93.6 106 47.2
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 8.2e-17 91.3 148 37.2
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 4.1e-16 89.0 146 35.6
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 5.3e-16 88.6 144 38.9
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 9.1e-16 87.8 148 37.2
Sed0004042 Sechium edule HOM05D003732 ORTHO05D004965 1.5e-15 87.0 142 38.0
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 3.4e-15 85.9 148 36.5
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 1.0e-14 84.3 145 38.6
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 1.0e-14 84.3 137 38.0
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 1.3e-14 84.0 140 35.0
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.3e-14 84.0 145 35.2
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 1.7e-14 83.6 140 37.1
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 1.7e-14 83.6 142 36.6
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 1.7e-14 83.6 138 37.0
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 2.2e-14 83.2 145 38.6
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 2.2e-14 83.2 140 35.7
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 2.2e-14 83.2 138 37.7
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 2.9e-14 82.8 145 38.6
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 2.9e-14 82.8 145 38.6
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 2.9e-14 82.8 138 35.5
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 2.9e-14 82.8 140 37.1
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.9e-14 82.8 148 35.8
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 3.8e-14 82.4 144 34.0
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 3.8e-14 82.4 144 34.0
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 3.8e-14 82.4 140 36.4
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 5.0e-14 82.0 140 36.4
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 5.0e-14 82.0 140 35.7
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 5.0e-14 82.0 140 35.0
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 5.0e-14 82.0 144 34.0
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 6.5e-14 81.6 140 36.4
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 6.5e-14 81.6 144 34.0
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 6.5e-14 81.6 140 35.0
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 6.5e-14 81.6 146 34.9
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 6.5e-14 81.6 140 34.3
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 6.5e-14 81.6 140 35.0
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 6.5e-14 81.6 140 35.7
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 8.5e-14 81.3 144 36.8
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 8.5e-14 81.3 140 35.0
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 1.1e-13 80.9 144 35.4
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.1e-13 80.9 144 34.0
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 1.1e-13 80.9 140 35.7
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 1.1e-13 80.9 144 34.0
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 1.1e-13 80.9 144 34.0
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 1.1e-13 80.9 143 34.3
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 1.4e-13 80.5 144 35.4
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.4e-13 80.5 140 35.0
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.4e-13 80.5 139 35.3
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 1.4e-13 80.5 144 36.8
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 1.4e-13 80.5 140 34.3
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 1.9e-13 80.1 141 35.5
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 1.9e-13 80.1 143 34.3
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.9e-13 80.1 122 37.7
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.9e-13 80.1 122 37.7
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 2.5e-13 79.7 144 34.0
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 2.5e-13 79.7 140 34.3
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 3.2e-13 79.3 144 35.4
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 3.2e-13 79.3 138 36.2
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 3.2e-13 79.3 144 36.1
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 3.2e-13 79.3 144 36.1
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 4.2e-13 79.0 140 33.6
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 4.2e-13 79.0 140 35.0
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 4.2e-13 79.0 144 34.0
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 4.2e-13 79.0 143 32.9
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 4.2e-13 79.0 140 32.9
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 4.2e-13 79.0 144 34.0
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 5.5e-13 78.6 138 34.8
MD03G1107400 Malus domestica HOM05D003732 ORTHO05D004965 5.5e-13 78.6 135 34.8
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 7.2e-13 78.2 140 33.6
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 7.2e-13 78.2 140 35.0
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 7.2e-13 78.2 122 38.5
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 7.2e-13 78.2 142 35.9
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 7.2e-13 78.2 140 35.7
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 9.4e-13 77.8 122 38.5
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.2e-12 77.4 140 34.3
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 1.2e-12 77.4 140 34.3
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 1.2e-12 77.4 140 34.3
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 1.2e-12 77.4 140 34.3
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.2e-12 77.4 140 34.3
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 1.6e-12 77.0 136 34.6
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 1.6e-12 77.0 154 34.4
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 2.1e-12 76.6 140 33.6
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 2.7e-12 76.3 140 32.9
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 2.7e-12 76.3 144 33.3
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 3.6e-12 75.9 140 33.6
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 4.7e-12 75.5 112 37.5
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 6.1e-12 75.1 122 36.9
Atru.chr3.3750 Acer truncatum HOM05D003732 ORTHO05D004965 8.0e-12 74.7 140 32.1
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 8.0e-12 74.7 122 36.9
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 8.0e-12 74.7 140 33.6
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 1.0e-11 74.3 140 33.6
Prupe.6G090200 Prunus persica HOM05D003732 ORTHO05D004965 1.0e-11 74.3 139 33.8
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 1.4e-11 73.9 107 35.5
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 1.8e-11 73.6 136 33.1
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 1.8e-11 73.6 140 32.9
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 2.3e-11 73.2 130 35.4
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 2.3e-11 73.2 158 31.6
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 3.9e-11 72.4 128 34.4
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 3.9e-11 72.4 137 34.3
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 5.2e-11 72.0 120 35.0
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 1.1e-10 70.9 139 32.4
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 1.5e-10 70.5 140 32.1
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 4.4e-10 68.9 129 36.4
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 7.4e-10 68.2 121 35.5
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 1.3e-09 67.4 122 32.0
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 1.7e-09 67.0 157 29.3
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 1.7e-09 67.0 157 31.2
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.2e-09 66.6 141 33.3
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 3.7e-09 65.9 145 32.4
BcaB05g22412 Brassica carinata HOM05D003732 ORTHO05D004965 4.8e-09 65.5 113 38.1
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 6.3e-09 65.1 172 28.5
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.4e-08 63.9 141 32.6
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 5.3e-08 62.0 141 31.9
SHI43202 Sapria himalayana HOM05D003732 ORTHO05D004965 1.7e-06 57.0 95 37.9
Peaxi162Scf00616g00319 Petunia axillaris HOM05D003732 ORTHO05D004965 5.0e-06 55.5 65 43.1
PGSC0003DMG401029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 5.0e-06 55.5 76 39.5
Haze_26759 Corylus avellana HOM05D003732 ORTHO05D004965 6.5e-06 55.1 113 31.0


User provided reference genes

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