Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.2e-71 273.1 141 100.0
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 5.4e-64 247.7 140 88.6
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 6.0e-63 244.2 144 86.1
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.3e-62 243.0 144 86.8
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 5.1e-62 241.1 144 86.1
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 3.3e-61 238.4 144 85.4
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 3.3e-61 238.4 141 85.8
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.3e-60 236.5 142 85.9
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 2.1e-60 235.7 141 84.4
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 4.8e-60 234.6 144 84.0
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 4.8e-60 234.6 139 84.9
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 8.1e-60 233.8 143 83.9
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.4e-59 233.0 141 83.7
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 1.8e-59 232.6 144 84.7
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.8e-59 232.6 141 83.7
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 1.8e-59 232.6 144 81.9
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 2.4e-59 232.3 143 83.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 3.1e-59 231.9 143 82.5
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 4.0e-59 231.5 142 83.1
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 4.0e-59 231.5 143 81.8
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 5.3e-59 231.1 142 82.4
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 5.3e-59 231.1 141 82.3
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 5.3e-59 231.1 144 82.6
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 6.9e-59 230.7 142 83.8
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.2e-58 229.9 146 81.5
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 1.5e-58 229.6 146 81.5
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 2.0e-58 229.2 146 81.5
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 2.0e-58 229.2 142 83.8
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.6e-58 228.8 150 80.0
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.6e-58 228.8 143 83.2
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 3.4e-58 228.4 144 82.6
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 3.4e-58 228.4 141 81.6
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 4.5e-58 228.0 144 81.9
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 5.8e-58 227.6 143 84.6
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 9.9e-58 226.9 143 82.5
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.7e-57 226.1 141 81.6
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 2.2e-57 225.7 143 83.9
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 2.9e-57 225.3 145 82.1
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 3.8e-57 224.9 143 81.1
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 6.4e-57 224.2 142 85.2
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.1e-56 223.4 139 84.9
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.4e-56 223.0 144 81.2
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 1.4e-56 223.0 141 80.1
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 1.4e-56 223.0 141 80.1
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 2.4e-56 222.2 131 88.5
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.2e-56 221.5 144 79.9
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 4.2e-56 221.5 141 83.0
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 5.4e-56 221.1 144 78.5
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 9.3e-56 220.3 143 80.4
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 9.3e-56 220.3 143 80.4
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 1.2e-55 219.9 132 85.6
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.2e-55 219.9 145 77.2
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.2e-55 219.9 145 78.6
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 1.2e-55 219.9 141 80.9
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 1.2e-55 219.9 141 80.9
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 1.6e-55 219.5 141 78.7
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 2.1e-55 219.2 143 82.5
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 2.1e-55 219.2 144 82.6
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.1e-55 219.2 144 78.5
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 2.7e-55 218.8 141 80.1
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 2.7e-55 218.8 144 77.8
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.5e-55 218.4 145 77.2
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 3.5e-55 218.4 144 77.1
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 3.5e-55 218.4 144 77.8
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 6.0e-55 217.6 144 78.5
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 6.0e-55 217.6 144 78.5
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 6.0e-55 217.6 144 79.2
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 6.0e-55 217.6 144 79.2
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 7.9e-55 217.2 141 78.7
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.0e-54 216.9 144 80.6
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 2.3e-54 215.7 170 70.0
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 2.3e-54 215.7 145 75.9
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 3.0e-54 215.3 148 75.7
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 3.0e-54 215.3 148 75.7
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 3.0e-54 215.3 148 75.7
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 81.2
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 3.9e-54 214.9 141 78.0
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 5.1e-54 214.5 143 79.0
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 5.1e-54 214.5 144 77.1
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 6.7e-54 214.2 130 84.6
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 6.7e-54 214.2 145 74.5
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 8.7e-54 213.8 143 78.3
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 8.7e-54 213.8 148 75.7
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 8.7e-54 213.8 148 75.0
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.1e-53 213.4 141 77.3
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.1e-53 213.4 145 75.9
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.9e-53 212.6 145 79.3
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.9e-53 212.6 148 79.1
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.9e-53 212.6 146 74.0
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 3.3e-53 211.8 144 74.3
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 3.3e-53 211.8 165 70.3
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 3.3e-53 211.8 143 77.6
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 4.3e-53 211.5 140 77.9
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 5.6e-53 211.1 147 73.5
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 1.3e-52 209.9 145 75.9
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.3e-52 209.9 139 77.7
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 2.8e-52 208.8 152 72.4
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 2.8e-52 208.8 147 72.8
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.8e-52 208.8 146 73.3
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.6e-52 208.4 141 77.3
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 8.1e-52 207.2 146 72.6
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 1.4e-51 206.5 141 75.9
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.4e-51 205.7 220 56.4
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 3.1e-51 205.3 147 75.5
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 3.1e-51 205.3 147 75.5
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 3.1e-51 205.3 110 90.0
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 4.0e-51 204.9 145 73.8
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 4.0e-51 204.9 141 77.3
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 6.9e-51 204.1 146 72.6
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 6.9e-51 204.1 133 78.9
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 6.9e-51 204.1 145 73.1
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 1.2e-50 203.4 107 95.3
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 74.8
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.5e-50 203.0 172 65.1
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 2.6e-50 202.2 105 98.1
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 7.6e-50 200.7 146 71.2
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 2.2e-49 199.1 140 74.3
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 3.8e-49 198.4 117 86.3
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 4.9e-49 198.0 145 71.7
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 6.4e-49 197.6 116 83.6
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 2.3e-46 189.1 120 77.5
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 3.9e-46 188.3 143 69.9
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.1e-45 186.8 116 80.2
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.3e-43 177.9 204 52.5
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 4.5e-42 174.9 92 92.4
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 5.8e-42 174.5 91 93.4
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 6.5e-41 171.0 88 93.2
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 5.5e-40 167.9 90 90.0
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 2.1e-39 166.0 109 78.9
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.4e-35 153.3 98 80.6
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.9e-32 142.9 120 58.3
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 7.2e-32 141.0 108 69.4
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 5.1e-30 134.8 141 55.3
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 6.7e-30 134.4 145 56.6
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 1.0e-25 120.6 108 58.3
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 7.2e-24 114.4 63 90.5
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.1e-23 112.8 60 91.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 1.1e-19 100.5 90 57.8
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 6.9e-19 97.8 86 53.5
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 1.2e-18 97.1 89 58.4
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 1.4e-14 83.6 113 45.1
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 1.8e-14 83.2 133 43.6
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 6.7e-14 81.3 59 74.6
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.1e-13 80.5 105 41.9
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 5.7e-13 78.2 63 60.3
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 5.3e-11 71.6 35 100.0
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 9.1e-11 70.9 64 59.4
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 2.0e-10 69.7 48 72.9
SHI01130 Sapria himalayana HOM05D004802 ORTHO05D005591 2.1e-07 59.7 54 61.1
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 6.1e-07 58.2 43 69.8
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 6.1e-07 58.2 43 69.8
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 6.1e-07 58.2 90 44.4
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 1.4e-06 57.0 58 56.9
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 3.0e-06 55.8 72 41.7
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 6.7e-06 54.7 29 82.8


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