Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 7.9e-120 433.7 208 100.0
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 5.7e-110 401.0 199 96.5
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 6.1e-96 354.4 200 83.5
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 6.3e-93 344.4 204 80.9
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 7.2e-81 304.3 195 76.4
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 2.7e-80 302.4 201 76.1
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 2.0e-78 296.2 201 73.6
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 4.4e-78 295.0 209 73.2
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 4.4e-78 295.0 201 72.6
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 7.5e-78 294.3 199 72.4
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 7.5e-78 294.3 203 74.9
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 9.7e-78 293.9 203 73.9
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.3e-77 293.5 200 71.0
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 3.7e-77 292.0 199 71.9
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 4.8e-77 291.6 204 70.1
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.4e-76 290.0 203 73.9
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 7.7e-75 284.3 194 70.6
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.8e-74 282.0 219 64.8
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.5e-74 280.8 183 72.1
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.5e-74 280.8 183 72.1
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.5e-73 279.3 190 72.1
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 4.2e-73 278.5 204 70.1
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 5.5e-73 278.1 202 68.3
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 5.5e-73 278.1 206 71.8
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 9.4e-73 277.3 199 71.9
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.2e-72 276.9 207 67.6
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 1.6e-72 276.6 199 66.3
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 6.8e-71 271.2 203 69.5
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 8.8e-71 270.8 202 66.3
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 2.0e-70 269.6 194 69.6
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.0e-70 269.6 210 65.7
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 2.6e-70 269.2 202 66.3
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 7.5e-70 267.7 204 65.7
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 7.5e-70 267.7 201 67.7
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 1.3e-69 266.9 211 65.4
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.8e-69 265.0 202 66.3
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 6.3e-69 264.6 204 65.7
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.8e-68 263.1 195 65.1
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.8e-68 263.1 179 70.4
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.8e-68 263.1 199 64.3
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 1.2e-67 260.4 205 68.8
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.2e-67 260.4 201 66.2
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 2.0e-67 259.6 206 68.9
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 2.0e-67 259.6 159 78.0
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 2.0e-67 259.6 200 71.0
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.0e-67 259.6 200 66.0
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.5e-67 258.8 202 64.4
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 3.5e-67 258.8 200 65.5
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 5.9e-67 258.1 200 66.5
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 7.7e-67 257.7 211 65.9
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.9e-66 255.8 207 65.7
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.9e-65 253.1 199 63.8
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.5e-65 252.7 207 64.7
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.3e-65 252.3 202 62.4
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 3.3e-65 252.3 205 65.9
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 4.2e-65 251.9 200 64.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 4.2e-65 251.9 178 69.1
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 4.2e-65 251.9 203 63.5
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 5.5e-65 251.5 199 64.3
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 9.5e-65 250.8 194 64.4
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 9.5e-65 250.8 206 62.1
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.6e-64 250.0 197 63.5
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 2.1e-64 249.6 199 67.3
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.1e-64 249.6 196 65.8
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 6.1e-64 248.1 200 63.0
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 8.0e-64 247.7 203 62.6
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.0e-63 247.3 203 64.0
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.0e-63 247.3 200 63.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.8e-63 246.5 184 68.5
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 4.0e-63 245.4 151 77.5
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 5.2e-63 245.0 177 69.5
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 1.5e-62 243.4 202 61.9
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 2.0e-62 243.0 171 73.1
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 2.0e-62 243.0 199 63.3
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 2.6e-62 242.7 147 74.1
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 2.2e-61 239.6 183 60.7
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.8e-61 239.2 200 61.0
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 2.8e-61 239.2 201 60.7
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 1.4e-60 236.9 165 69.1
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.4e-60 236.9 221 56.6
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.4e-60 236.1 199 61.8
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 3.1e-60 235.7 183 60.1
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 2.0e-59 233.0 200 60.5
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.0e-59 233.0 200 60.5
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 2.0e-59 233.0 200 60.5
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.7e-59 232.6 200 60.0
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 7.8e-59 231.1 200 60.0
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.9e-58 229.2 203 60.6
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 8.6e-58 227.6 199 60.8
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.5e-57 226.9 145 73.8
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 4.3e-57 225.3 219 56.2
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 3.1e-55 219.2 217 54.4
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 6.8e-55 218.0 164 63.4
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 8.9e-55 217.6 131 73.3
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.5e-54 216.9 183 60.1
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 3.4e-54 215.7 161 65.2
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.3e-53 213.8 219 53.4
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 2.9e-53 212.6 112 87.5
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 6.0e-51 204.9 162 63.0
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 7.8e-51 204.5 178 59.0
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.0e-50 204.1 140 70.0
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 3.9e-50 202.2 161 59.0
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 9.5e-49 197.6 170 61.2
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 5.2e-47 191.8 157 65.0
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 5.2e-47 191.8 157 65.0
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 5.8e-46 188.3 142 59.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.3e-45 187.2 113 78.8
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 4.1e-44 182.2 162 54.3
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 1.6e-43 180.3 137 66.4
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 2.3e-42 176.4 111 67.6
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.9e-41 173.3 141 66.0
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 1.8e-39 166.8 139 64.7
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 4.4e-38 162.2 206 47.6
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.0e-34 151.0 93 76.3
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 3.9e-34 149.1 82 85.4
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.8e-31 140.2 139 53.2
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 3.8e-29 132.5 112 50.9
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 6.4e-29 131.7 138 46.4
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 3.5e-27 125.9 131 54.2
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 3.9e-26 122.5 116 44.0
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.1e-24 116.7 67 79.1
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.3e-17 91.7 114 34.2
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.1e-07 59.7 36 72.2


User provided reference genes

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