Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 4.5e-62 241.1 124 100.0
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 2.5e-52 208.8 123 90.2
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 2.5e-52 208.8 123 90.2
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.2e-24 115.9 115 56.5
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.8e-24 115.5 122 54.1
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 1.2e-22 110.2 119 51.3
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 6.5e-21 104.4 114 53.5
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 8.5e-21 104.0 119 52.9
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 7.2e-20 100.9 123 49.6
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 9.4e-20 100.5 117 51.3
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 2.1e-19 99.4 120 55.0
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 3.4e-17 92.0 114 48.2
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 1.8e-15 86.3 112 48.2
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 2.4e-15 85.9 120 45.0
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 3.1e-15 85.5 125 47.2
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 5.4e-15 84.7 124 45.2
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 7.0e-15 84.3 121 47.9
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.0e-14 82.8 120 44.2
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 3.5e-14 82.0 121 45.5
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 3.5e-14 82.0 120 46.7
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 1.1e-12 77.0 125 44.0
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 1.5e-12 76.6 118 43.2
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.5e-12 76.6 125 44.0
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 2.1e-11 72.8 120 43.3
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 8.0e-11 70.9 123 44.7
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 1.0e-10 70.5 131 38.9
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 1.4e-10 70.1 115 39.1
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 1.8e-10 69.7 128 39.8
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 4.0e-10 68.6 115 43.5
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 5.2e-10 68.2 97 45.4
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 8.8e-10 67.4 126 38.9
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 1.5e-09 66.6 137 36.5
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 1.7e-08 63.2 108 41.7
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 2.8e-08 62.4 130 34.6
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 6.3e-08 61.2 117 37.6
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 1.8e-07 59.7 112 38.4
Sed0020424 Sechium edule HOM05D022550 ORTHO05D025091 5.4e-07 58.2 120 41.7
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 7.0e-07 57.8 127 35.4
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 1.6e-06 56.6 136 36.0
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 2.0e-06 56.2 113 37.2
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 2.7e-06 55.8 132 37.1
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 7.7e-06 54.3 138 37.0


User provided reference genes

Program Settings