Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 1.1e-86 323.6 196 100.0
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.2e-66 256.9 196 84.7
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.8e-61 237.7 196 77.0
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.9e-59 233.0 197 75.1
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.6e-56 221.1 196 73.5
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 7.6e-56 221.1 196 73.5
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.2e-55 219.5 202 72.3
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.9e-55 219.2 196 73.0
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.4e-54 216.9 196 71.4
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 2.4e-54 216.1 198 74.2
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 2.4e-54 216.1 197 72.6
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.4e-54 216.1 185 72.4
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 3.2e-54 215.7 198 71.2
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 3.2e-54 215.7 198 71.7
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 5.4e-54 214.9 203 70.4
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.7e-53 212.6 177 74.0
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.0e-52 210.7 189 73.0
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.0e-52 210.7 188 71.3
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 3.9e-52 208.8 203 69.0
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 6.6e-52 208.0 203 69.5
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 8.7e-52 207.6 196 71.4
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 8.7e-52 207.6 189 70.4
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 3.3e-51 205.7 174 74.7
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 3.3e-51 205.7 196 68.9
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 3.3e-51 205.7 196 68.9
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 4.3e-51 205.3 201 67.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 7.3e-51 204.5 201 68.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.2e-50 203.8 197 70.1
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.6e-50 203.4 203 68.0
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.6e-50 203.4 202 68.3
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.6e-50 203.4 178 71.9
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 2.1e-50 203.0 196 69.9
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.7e-50 201.8 196 67.3
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.7e-50 201.8 203 67.5
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 4.7e-50 201.8 178 71.9
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 4.7e-50 201.8 178 71.9
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 6.2e-50 201.4 199 69.8
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 8.1e-50 201.1 154 83.1
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 2.4e-49 199.5 176 72.7
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 2.4e-49 199.5 174 71.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 3.1e-49 199.1 179 73.2
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 5.3e-49 198.4 178 71.9
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 6.9e-49 198.0 203 67.0
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 6.9e-49 198.0 196 65.8
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 9.0e-49 197.6 176 69.9
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 1.2e-48 197.2 173 72.3
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 4.4e-48 195.3 167 76.0
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 5.8e-48 194.9 202 66.8
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 5.8e-48 194.9 198 68.7
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 5.8e-48 194.9 178 71.9
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 7.6e-48 194.5 178 71.9
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 7.6e-48 194.5 173 73.4
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 1.7e-47 193.4 154 81.2
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 4.9e-47 191.8 163 75.5
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 6.4e-47 191.4 149 80.5
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 2.4e-46 189.5 173 71.1
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 2.4e-46 189.5 146 82.9
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 3.2e-46 189.1 181 71.8
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 3.2e-46 189.1 181 71.8
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.2e-46 189.1 181 69.6
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 4.2e-46 188.7 181 71.3
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 7.1e-46 188.0 161 73.3
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.6e-45 186.8 181 71.8
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.6e-45 186.8 179 67.0
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.6e-45 186.8 173 69.4
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 1.6e-45 186.8 199 65.3
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 6.0e-45 184.9 151 78.8
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 6.0e-45 184.9 181 69.1
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 6.0e-45 184.9 194 65.5
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 6.0e-45 184.9 181 70.7
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 7.8e-45 184.5 174 70.1
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.0e-44 184.1 165 71.5
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 1.0e-44 184.1 159 75.5
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.3e-44 183.7 162 72.2
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.7e-44 183.3 181 69.1
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 1.7e-44 183.3 197 65.5
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 2.3e-44 183.0 166 71.1
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 2.3e-44 183.0 170 72.9
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 3.9e-44 182.2 182 68.7
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 3.9e-44 182.2 182 68.7
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 5.1e-44 181.8 182 68.7
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.1e-44 181.8 181 66.9
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.1e-44 181.8 181 66.9
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 6.6e-44 181.4 158 75.3
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.1e-43 180.6 182 68.7
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.9e-43 179.9 182 68.1
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 2.5e-43 179.5 163 72.4
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 2.5e-43 179.5 196 65.8
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 2.5e-43 179.5 174 70.1
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 3.3e-43 179.1 159 73.6
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 3.3e-43 179.1 206 61.2
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 4.3e-43 178.7 196 63.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 5.6e-43 178.3 196 61.2
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 7.3e-43 177.9 181 68.5
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.3e-42 177.2 149 77.9
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 6.2e-42 174.9 173 68.8
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.1e-41 174.1 196 63.3
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.4e-41 172.9 174 66.7
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.1e-41 172.6 150 75.3
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.9e-41 171.4 172 66.3
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 6.4e-39 164.9 181 65.2
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 1.2e-37 160.6 157 70.1
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.6e-37 160.2 174 62.6
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 6.7e-36 154.8 146 73.3
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 7.4e-35 151.4 180 59.4
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.0e-33 145.6 202 55.0
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 4.5e-32 142.1 174 58.6
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.3e-26 124.0 106 60.4
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.8e-26 122.9 161 54.7
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 3.7e-26 122.5 162 55.6
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 3.8e-23 112.5 127 57.5
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.9e-22 110.2 160 53.1
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 1.0e-20 104.4 175 49.7
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 3.9e-20 102.4 112 66.1
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.3e-19 99.4 140 57.1
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 7.4e-19 98.2 150 51.3
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 2.8e-18 96.3 78 65.4
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.1e-17 94.4 110 58.2
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 1.1e-14 84.3 173 43.9
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 7.9e-13 78.2 117 50.4
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.8e-12 77.0 74 51.4


User provided reference genes

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