Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 1.1e-188 663.3 367 100.0
Haze_07363 Corylus avellana HOM05D005535 ORTHO05D006753 3.6e-168 595.1 367 91.8
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 6.2e-128 461.5 371 75.2
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 5.3e-119 431.8 374 71.9
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 1.1e-116 424.1 366 71.0
CSS0007804 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 4.6e-107 392.1 370 67.0
Ciclev10020848m.g Citrus clementina HOM05D005535 ORTHO05D006753 7.7e-102 374.8 361 65.1
Actinidia37646 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.4e-100 370.5 368 63.6
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 2.5e-100 369.8 308 74.0
GSVIVG01008044001 Vitis vinifera HOM05D005535 ORTHO05D006753 2.5e-100 369.8 369 63.4
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.2e-99 367.5 355 65.4
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 1.6e-99 367.1 366 63.7
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 3.9e-98 362.5 366 64.2
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 1.5e-97 360.5 333 66.4
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 9.7e-97 357.8 367 63.2
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 1.7e-96 357.1 339 65.2
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 1.7e-96 357.1 386 60.9
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 1.4e-95 354.0 368 61.4
Actinidia19054 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.4e-95 353.2 366 61.5
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 5.3e-95 352.1 368 62.2
Lj9A460T58 Lonicera japonica HOM05D005535 ORTHO05D006753 6.9e-95 351.7 360 62.8
ClCG06G016340 Citrullus lanatus HOM05D005535 ORTHO05D006753 8.5e-93 344.7 371 62.5
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 1.4e-92 344.0 368 60.9
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 1.4e-92 344.0 344 64.5
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 1.4e-92 344.0 369 61.8
CANSAT80G1786 Cannabis sativa HOM05D005535 ORTHO05D006753 3.6e-91 339.3 366 60.9
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 4.7e-91 339.0 368 59.5
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.0e-90 337.8 373 61.4
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 1.4e-90 337.4 372 60.8
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 2.3e-90 336.7 358 58.4
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 1.1e-89 334.3 368 60.6
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 5.7e-89 332.0 370 61.4
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 5.7e-89 332.0 350 60.0
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 7.4e-89 331.6 371 60.4
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 2.2e-88 330.1 360 57.8
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 2.2e-88 330.1 362 60.5
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 4.8e-88 328.9 370 60.0
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 1.1e-87 327.8 371 60.6
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 1.4e-87 327.4 370 60.3
Glyma.04G173200 Glycine max HOM05D005535 ORTHO05D006753 3.1e-87 326.2 373 57.1
COL.COLO4_14041 Corchorus olitorius HOM05D005535 ORTHO05D006753 1.9e-84 317.0 370 58.9
Glyma.06G191000 Glycine max HOM05D005535 ORTHO05D006753 2.5e-84 316.6 373 56.6
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 4.2e-84 315.8 392 55.6
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 9.4e-84 314.7 369 59.6
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 4.7e-83 312.4 372 58.9
Nitab4.5_0004785g0010 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.4e-82 310.8 367 57.2
vmacro17524 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 2.3e-82 310.1 371 57.4
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 2.8e-80 303.1 371 58.5
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 3.7e-80 302.8 381 57.2
Nitab4.5_0000785g0140 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.4e-79 300.8 371 55.5
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 2.4e-79 300.1 370 54.9
Migut.I00138 Erythranthe guttata HOM05D005535 ORTHO05D006753 7.0e-79 298.5 371 55.5
Cpa.g.sc17.224 Carica papaya HOM05D005535 ORTHO05D006753 9.1e-79 298.1 337 60.2
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 9.1e-79 298.1 371 55.8
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 1.6e-78 297.4 281 65.8
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 5.9e-78 295.4 377 55.7
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 1.0e-77 294.7 351 54.7
Lalb_Chr13g0303381 Lupinus albus HOM05D005535 ORTHO05D006753 2.2e-77 293.5 359 56.0
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 2.9e-77 293.1 404 54.2
MSTRG.11394 Avicennia marina HOM05D005535 ORTHO05D006753 5.0e-77 292.4 365 53.2
TPR.G27376 Trifolium pratense HOM05D005535 ORTHO05D006753 1.1e-76 291.2 400 51.5
AUR62021726 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.9e-76 290.4 370 53.2
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 1.9e-76 290.4 331 59.2
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 1.9e-76 290.4 370 53.2
EL10Ac5g10956 Beta vulgaris HOM05D005535 ORTHO05D006753 4.2e-76 289.3 366 51.9
Cc04_g15390 Coffea canephora HOM05D005535 ORTHO05D006753 4.2e-76 289.3 366 53.6
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 7.2e-76 288.5 370 54.9
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 9.4e-76 288.1 309 60.5
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 1.6e-75 287.3 382 53.9
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 2.1e-75 287.0 376 56.1
MD14G1196400 Malus domestica HOM05D005535 ORTHO05D006753 2.1e-75 287.0 370 56.8
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 3.6e-75 286.2 381 55.4
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 3.6e-75 286.2 364 53.8
Nitab4.5_0000269g0110 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.4e-74 284.3 340 54.1
Nitab4.5_0004931g0020 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.8e-74 283.9 362 52.5
MD06G1189400 Malus domestica HOM05D005535 ORTHO05D006753 2.3e-74 283.5 345 56.8
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 4.0e-74 282.7 370 52.2
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 8.8e-74 281.6 356 52.8
Psat4g052400 Pisum sativum HOM05D005535 ORTHO05D006753 1.5e-73 280.8 353 55.5
PGSC0003DMG401018143 Solanum tuberosum HOM05D005535 ORTHO05D006753 1.5e-73 280.8 365 52.1
SalBow5G0107 Salvia bowleyana HOM05D005535 ORTHO05D006753 4.4e-73 279.3 361 52.4
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 7.5e-73 278.5 351 57.3
Phvul.003G191800 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 9.8e-73 278.1 368 54.3
VMungo1215G1657 Vigna mungo HOM05D005535 ORTHO05D006753 9.8e-73 278.1 366 53.0
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 4.8e-72 275.8 380 53.7
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.4e-71 274.2 357 52.9
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 1.8e-71 273.9 331 55.3
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 2.4e-71 273.5 334 56.6
Ca_21840_v3 Cicer arietinum L. HOM05D005535 ORTHO05D006753 7.0e-71 271.9 377 52.0
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 3.5e-70 269.6 344 54.1
Sed0000211 Sechium edule HOM05D005535 ORTHO05D006753 1.7e-69 267.3 372 54.6
Sopen03g032160 Solanum pennellii HOM05D005535 ORTHO05D006753 1.7e-69 267.3 360 51.4
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 2.3e-69 266.9 365 53.2
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 1.9e-68 263.8 347 54.5
Medtr4g108100 Medicago truncatula HOM05D005535 ORTHO05D006753 4.2e-68 262.7 391 50.4
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 1.6e-67 260.8 382 51.0
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 2.8e-67 260.0 324 52.5
Solyc03g113090.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 3.6e-67 259.6 361 49.9
HanXRQChr09g0271071 Helianthus annuus HOM05D005535 ORTHO05D006753 2.6e-65 253.4 364 49.7
Ah.02g113290 Amaranthus hybridus HOM05D005535 ORTHO05D006753 3.4e-65 253.1 366 49.5
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 1.7e-64 250.8 362 46.1
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 3.7e-64 249.6 364 51.9
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 1.6e-62 244.2 373 49.6
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 2.7e-62 243.4 365 47.9
ECA232G4425 Erigeron canadensis HOM05D005535 ORTHO05D006753 1.7e-61 240.7 364 50.0
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 1.1e-60 238.0 361 48.8
Aqoxy3G03311 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 1.5e-57 227.6 330 48.5
HanXRQChr05g0158021 Helianthus annuus HOM05D005535 ORTHO05D006753 4.6e-54 216.1 363 46.3
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 5.0e-53 212.6 297 48.8
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 6.6e-53 212.2 370 44.9
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 8.6e-53 211.8 382 45.5
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 2.5e-52 210.3 325 51.4
THA.LOC104821430 Tarenaya hassleriana HOM05D005535 ORTHO05D006753 3.3e-52 209.9 410 40.5
Sp2g25720 Schrenkiella parvula HOM05D005535 ORTHO05D006753 3.6e-51 206.5 301 48.2
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 3.1e-50 203.4 355 46.5
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 5.2e-50 202.6 351 42.7
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 5.8e-49 199.1 338 45.0
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 7.5e-49 198.7 340 43.5
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 5.4e-47 192.6 342 43.3
Thhalv10004313m.g Eutrema salsugineum HOM05D005535 ORTHO05D006753 4.6e-46 189.5 420 39.5
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 6.0e-46 189.1 377 41.9
AL8G39440 Arabidopsis lyrata HOM05D005535 ORTHO05D006753 7.8e-46 188.7 422 38.9
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 7.8e-46 188.7 416 39.4
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 1.7e-45 187.6 303 45.9
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 1.5e-44 184.5 412 39.1
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 1.5e-44 184.5 412 39.1
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 4.3e-44 183.0 413 39.5
unitig_26.g9639 Utricularia gibba HOM05D005535 ORTHO05D006753 4.7e-43 179.5 339 45.1
AT5G62550 Arabidopsis thaliana HOM05D005535 ORTHO05D006753 6.8e-42 175.6 270 48.5
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 8.9e-42 175.3 425 38.1
Carub.0008s2322 Capsella rubella HOM05D005535 ORTHO05D006753 3.2e-39 166.8 375 39.7
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 1.1e-31 141.7 181 54.7
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 3.0e-21 107.1 444 30.9
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 2.8e-11 73.9 178 33.7
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 6.2e-11 72.8 109 39.4
TAR375G0593 Trochodendron aralioides HOM05D005535 ORTHO05D006753 1.4e-10 71.6 78 55.1
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 3.1e-10 70.5 64 53.1
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 1.5e-09 68.2 96 41.7
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 4.5e-09 66.6 205 31.2
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 5.8e-09 66.2 83 44.6
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 5.8e-09 66.2 141 35.5
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 9.9e-09 65.5 141 35.5
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 9.9e-09 65.5 160 33.8
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 2.2e-08 64.3 177 31.1
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 2.9e-08 63.9 96 39.6
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 2.9e-08 63.9 108 35.2
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 2.9e-08 63.9 87 40.2
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 2.9e-08 63.9 242 26.9
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 4.9e-08 63.2 199 30.7
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 6.4e-08 62.8 273 30.4
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 6.4e-08 62.8 80 42.5
CARHR276330 Cardamine hirsuta HOM05D005535 ORTHO05D018759 8.4e-08 62.4 210 33.3
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 1.1e-07 62.0 93 40.9
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 1.1e-07 62.0 107 36.4
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 1.1e-07 62.0 179 31.3
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 1.4e-07 61.6 146 34.2
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 1.9e-07 61.2 258 28.3
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 1.9e-07 61.2 179 31.3
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 3.2e-07 60.5 125 37.6
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 3.2e-07 60.5 194 30.9
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 4.2e-07 60.1 165 30.9
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 5.5e-07 59.7 116 32.8
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 7.1e-07 59.3 74 44.6
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 2.1e-06 57.8 171 32.2
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 2.1e-06 57.8 183 28.4
Potri.017G142966 Populus trichocarpa HOM05D005535 ORTHO05D006753 2.7e-06 57.4 109 42.2
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 3.5e-06 57.0 233 29.2
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 6.0e-06 56.2 214 28.5
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 6.0e-06 56.2 128 35.9
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 6.0e-06 56.2 135 32.6
MD01G1041800 Malus domestica HOM05D005535 ORTHO05D006753 7.9e-06 55.8 48 68.8
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 7.9e-06 55.8 234 28.2


User provided reference genes

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