Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 3.5e-166 588.2 288 100.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.1e-119 433.7 249 88.4
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 4.1e-119 431.8 249 86.3
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 9.6e-116 420.6 249 83.5
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-112 409.8 249 79.9
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-112 409.8 249 79.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 2.9e-112 409.1 249 80.3
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 8.4e-112 407.5 249 80.7
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.1e-111 407.1 249 80.3
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 5.4e-111 404.8 249 80.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 1.2e-110 403.7 249 80.7
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.6e-110 403.3 249 79.9
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.6e-110 403.3 245 81.2
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.1e-110 402.9 249 79.5
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 6.0e-110 401.4 249 79.1
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 6.0e-110 401.4 249 79.5
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.0e-109 400.6 249 79.5
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 1.3e-109 400.2 249 79.5
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 8.7e-109 397.5 249 77.9
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 8.7e-109 397.5 249 78.7
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.5e-108 396.0 250 78.4
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.5e-108 396.0 250 78.8
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.3e-108 395.6 259 76.8
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 4.3e-108 395.2 259 76.4
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 4.3e-108 395.2 250 78.4
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 9.6e-108 394.0 250 78.4
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 9.6e-108 394.0 250 78.0
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.6e-107 393.3 250 77.2
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.1e-107 392.9 249 75.9
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 2.8e-107 392.5 249 75.9
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.8e-107 392.5 250 78.0
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.8e-107 392.5 249 77.1
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 6.2e-107 391.3 250 77.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 8.1e-107 391.0 245 76.7
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.4e-106 390.2 249 77.1
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.4e-106 390.2 249 75.5
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 4.0e-106 388.7 249 77.1
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.2e-105 387.1 245 75.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.0e-105 386.3 249 74.7
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 5.8e-105 384.8 249 74.7
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.2e-104 382.9 249 74.3
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 2.2e-104 382.9 249 75.1
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 3.8e-104 382.1 251 75.3
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.9e-104 381.7 249 75.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 4.9e-104 381.7 250 74.0
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 6.4e-104 381.3 249 73.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 6.4e-104 381.3 249 73.5
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 8.4e-104 380.9 250 73.6
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.1e-103 380.6 251 76.1
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 2.4e-103 379.4 245 73.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 3.2e-103 379.0 250 73.6
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 3.2e-103 379.0 245 74.3
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 4.2e-103 378.6 249 73.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.2e-102 377.1 245 74.3
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 2.1e-102 376.3 249 70.3
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 2.7e-102 375.9 251 73.7
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 4.6e-102 375.2 245 73.9
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 1.7e-101 373.2 251 72.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.7e-101 373.2 249 75.9
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 2.3e-101 372.9 250 72.0
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.0e-101 372.5 295 66.4
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 3.9e-101 372.1 250 72.0
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.9e-101 372.1 250 71.6
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 3.9e-101 372.1 249 73.5
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.9e-101 372.1 250 72.0
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.1e-101 371.7 250 72.0
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 8.7e-101 370.9 249 72.7
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 8.7e-101 370.9 250 72.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 1.1e-100 370.5 249 73.1
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.1e-100 370.5 249 73.1
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.5e-100 370.2 246 72.8
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.9e-100 369.8 246 72.8
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.9e-100 369.8 246 72.8
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 2.5e-100 369.4 249 70.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 5.6e-100 368.2 251 72.1
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 3.6e-99 365.5 245 74.3
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 1.4e-98 363.6 249 72.3
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 1.5e-97 360.1 249 72.3
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.0e-97 359.8 261 69.3
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 2.0e-97 359.8 249 71.1
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 9.9e-97 357.5 252 69.8
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.7e-96 356.7 253 70.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 2.2e-96 356.3 249 71.5
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 2.2e-96 356.3 278 65.5
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.9e-95 353.2 249 67.1
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 3.2e-95 352.4 252 69.0
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.1e-94 349.7 249 68.7
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 7.4e-92 341.3 249 64.7
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 7.9e-86 321.2 249 64.7
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.9e-84 316.6 245 62.0
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.3e-80 303.9 250 59.2
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 5.5e-79 298.5 366 47.0
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 5.7e-76 288.5 202 72.8
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.8e-74 283.5 250 58.0
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.8e-74 283.5 250 58.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.8e-74 283.5 196 67.9
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 6.9e-74 281.6 246 55.7
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.6e-73 279.6 219 62.6
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 8.5e-72 274.6 249 59.0
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 8.8e-69 264.6 176 75.6
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.8e-43 179.1 127 64.6
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 9.5e-39 164.9 125 68.8
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.5e-31 140.2 128 50.8
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.6e-30 136.3 73 82.2
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 3.7e-27 126.3 73 76.7
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 6.8e-21 105.5 65 75.4
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 2.2e-19 100.5 56 80.4
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.7e-16 90.9 73 53.4
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 3.0e-16 90.1 86 57.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.5e-12 77.8 59 67.8
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.5e-07 58.5 103 35.9


User provided reference genes

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