Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 1.8e-136 489.2 238 100.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 6.1e-84 314.7 180 85.6
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 1.4e-80 303.5 185 80.0
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 4.0e-75 285.4 191 77.0
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 4.0e-75 285.4 181 75.7
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 4.0e-75 285.4 181 75.7
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 7.5e-74 281.2 187 75.4
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 7.5e-74 281.2 186 74.7
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 7.5e-74 281.2 195 71.8
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 2.2e-73 279.6 189 74.6
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 6.3e-73 278.1 181 75.1
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.4e-72 276.9 200 71.5
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 2.4e-72 276.2 188 75.0
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.2e-71 273.9 187 71.7
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 3.5e-71 272.3 180 72.2
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.0e-70 270.8 187 72.7
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.1e-69 267.3 186 72.0
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.5e-69 266.9 186 72.6
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 9.5e-69 264.2 193 73.1
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.8e-68 262.7 182 71.4
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.8e-68 262.7 192 73.4
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.8e-68 262.7 192 73.4
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 3.6e-68 262.3 180 71.7
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 4.7e-68 261.9 184 68.5
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.0e-67 260.8 192 72.9
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 4.0e-67 258.8 187 72.7
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.0e-67 258.8 188 68.6
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 1.5e-66 256.9 186 69.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 7.5e-66 254.6 188 68.1
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.1e-64 250.8 180 70.0
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 5.4e-64 248.4 180 70.0
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 5.4e-64 248.4 187 69.0
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 3.5e-63 245.7 181 69.1
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 4.5e-63 245.4 185 69.2
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.0e-62 244.2 188 67.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 5.0e-62 241.9 186 68.8
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 8.6e-62 241.1 187 64.2
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.1e-61 240.7 188 67.0
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-61 240.4 186 67.2
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 2.5e-61 239.6 186 67.2
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.5e-61 239.6 216 59.7
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.3e-61 239.2 189 65.1
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 3.3e-61 239.2 187 67.9
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 4.3e-61 238.8 182 67.6
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 5.6e-61 238.4 187 64.7
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 5.6e-61 238.4 181 66.9
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 7.3e-61 238.0 184 69.0
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 7.3e-61 238.0 180 67.8
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 7.3e-61 238.0 193 65.3
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.2e-60 237.3 182 66.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.6e-60 236.9 182 69.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 2.1e-60 236.5 187 66.3
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.1e-60 236.5 182 69.8
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 2.8e-60 236.1 185 65.9
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.6e-60 235.7 181 64.1
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.6e-60 235.7 182 69.2
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.0e-59 234.2 182 67.6
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.0e-59 234.2 177 67.2
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 5.2e-59 231.9 188 66.5
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 5.8e-58 228.4 190 64.2
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 1.3e-57 227.3 182 65.9
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.3e-57 227.3 182 65.4
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 1.7e-57 226.9 182 65.4
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.9e-57 226.1 129 82.9
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.1e-56 224.2 189 65.6
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.9e-56 223.4 152 73.7
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 2.7e-55 219.5 187 61.5
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.5e-55 219.2 187 61.5
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.9e-54 215.7 134 77.6
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.3e-53 211.5 188 59.6
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 7.3e-53 211.5 192 59.9
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.4e-51 207.2 155 72.3
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 1.4e-51 207.2 183 61.2
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.3e-51 206.5 172 58.7
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 5.2e-51 205.3 191 59.2
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.2e-50 204.1 186 59.7
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 5.8e-50 201.8 155 66.5
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 7.5e-50 201.4 195 60.0
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 9.2e-48 194.5 184 58.7
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 9.2e-48 194.5 189 58.2
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 9.2e-48 194.5 189 58.2
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 3.5e-47 192.6 127 74.8
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 3.5e-47 192.6 127 74.8
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 3.5e-47 192.6 127 74.8
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 3.5e-47 192.6 127 74.8
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 3.5e-47 192.6 127 74.8
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 4.6e-47 192.2 127 74.8
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 4.6e-47 192.2 127 74.8
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 4.6e-47 192.2 127 74.8
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 4.6e-47 192.2 127 74.8
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 7.8e-47 191.4 148 66.9
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 7.8e-47 191.4 148 66.9
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.0e-46 191.0 127 74.0
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.0e-46 191.0 117 80.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.7e-46 190.3 127 74.0
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 5.6e-45 185.3 133 71.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 9.5e-45 184.5 184 56.5
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 2.0e-42 176.8 148 61.5
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 7.5e-42 174.9 117 68.4
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 5.4e-40 168.7 186 55.4
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.0e-38 164.5 180 53.9
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 6.6e-38 161.8 139 59.0
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 5.6e-37 158.7 133 60.9
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.1e-35 154.5 114 63.2
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.2e-34 151.0 124 65.3
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 1.7e-30 137.1 109 62.4
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 5.1e-30 135.6 168 48.2
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.7e-23 113.2 96 63.5
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.6e-20 104.0 110 49.1
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 9.9e-18 94.7 102 46.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 9.9e-18 94.7 160 37.5
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 2.4e-11 73.6 99 47.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.2e-09 67.0 52 73.1
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 4.2e-08 62.8 185 29.7


User provided reference genes

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