Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.2e-82 308.9 158 100.0
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 6.3e-61 237.7 158 82.3
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 5.5e-57 224.6 158 75.3
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 1.6e-56 223.0 161 73.3
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 2.1e-56 222.6 158 74.7
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 3.0e-55 218.8 158 74.1
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 3.0e-55 218.8 160 74.4
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 4.0e-55 218.4 149 75.2
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.1e-54 216.9 158 70.9
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 3.7e-53 211.8 161 73.3
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.1e-52 210.3 164 70.1
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.1e-52 210.3 159 70.4
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 4.1e-52 208.4 164 68.9
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 7.0e-52 207.6 155 72.3
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.6e-51 206.5 159 67.9
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.0e-51 206.1 158 66.5
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 2.7e-51 205.7 166 68.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 3.5e-51 205.3 158 69.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 4.5e-51 204.9 146 74.0
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 3.8e-50 201.8 159 68.6
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 8.5e-50 200.7 158 67.7
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 8.5e-50 200.7 155 67.1
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.1e-49 200.3 158 65.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 3.2e-49 198.7 160 67.5
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.2e-49 197.6 154 68.2
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.2e-48 196.8 159 66.7
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 4.7e-48 194.9 156 62.8
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 1.0e-47 193.7 165 65.5
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.0e-47 193.7 160 66.2
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.4e-47 193.4 158 63.3
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.4e-47 193.4 160 65.0
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.4e-47 193.4 156 66.0
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 2.3e-47 192.6 122 79.5
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 3.0e-47 192.2 156 66.0
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 6.8e-47 191.0 123 77.2
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 8.8e-47 190.7 156 64.7
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 2.6e-46 189.1 164 64.6
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 5.7e-46 188.0 123 76.4
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 5.7e-46 188.0 158 63.9
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 9.8e-46 187.2 161 65.8
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 1.7e-45 186.4 123 74.8
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.8e-45 185.7 122 73.8
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 3.7e-45 185.3 164 64.0
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 6.3e-45 184.5 164 64.6
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.4e-44 183.3 160 63.1
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.8e-44 183.0 162 64.2
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.8e-44 183.0 162 64.2
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 2.4e-44 182.6 165 63.0
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 3.1e-44 182.2 142 66.9
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 4.1e-44 181.8 159 62.3
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 4.1e-44 181.8 139 68.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 7.0e-44 181.0 156 64.1
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.2e-43 180.3 162 64.8
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.0e-43 179.5 169 61.5
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 4.5e-43 178.3 132 69.7
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 4.5e-43 178.3 160 61.2
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 5.9e-43 177.9 121 76.0
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 7.7e-43 177.6 146 65.1
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-42 176.8 122 73.8
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.3e-42 176.8 181 58.0
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 2.9e-42 175.6 149 61.1
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.9e-42 175.6 122 73.8
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 2.9e-42 175.6 136 64.7
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 3.8e-42 175.3 137 65.0
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 5.0e-42 174.9 121 70.2
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 6.5e-42 174.5 153 60.8
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.1e-41 173.7 122 72.1
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.5e-41 173.3 132 65.9
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.5e-41 173.3 153 58.8
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.5e-41 173.3 153 58.8
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.9e-41 172.9 124 69.4
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 2.5e-41 172.6 158 56.3
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.5e-41 172.6 122 71.3
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.5e-41 172.6 158 57.0
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 4.2e-41 171.8 132 68.9
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 4.2e-41 171.8 158 59.5
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 5.5e-41 171.4 158 60.8
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 5.5e-41 171.4 133 66.2
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.1e-40 169.5 163 57.1
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 2.3e-39 166.0 103 78.6
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 6.8e-39 164.5 138 60.9
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.2e-38 163.7 147 61.9
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 2.6e-38 162.5 166 57.2
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 2.6e-38 162.5 166 57.2
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 3.4e-38 162.2 166 57.2
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 3.4e-38 162.2 166 57.2
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.8e-36 156.4 144 54.9
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 5.4e-36 154.8 118 64.4
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 7.0e-36 154.5 159 56.0
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.0e-35 152.9 119 63.9
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.7e-35 152.5 108 65.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 3.5e-35 152.1 104 71.2
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 5.9e-35 151.4 154 53.2
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.5e-33 146.7 113 66.4
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.9e-33 146.4 122 62.3
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 3.6e-32 142.1 130 59.2
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 8.0e-32 141.0 87 75.9
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.0e-31 140.6 108 64.8
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 4.0e-31 138.7 155 51.6
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 5.7e-30 134.8 136 53.7
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.9e-29 132.5 100 61.0
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.7e-29 132.1 110 60.0
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 3.6e-24 115.5 72 73.6
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.6e-24 115.5 132 50.0
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 9.8e-22 107.5 97 60.8
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 1.3e-18 97.1 83 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 9.8e-14 80.9 77 50.6
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 1.6e-11 73.6 59 55.9
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 4.6e-11 72.0 69 46.4
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 2.5e-09 66.2 98 36.7
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.6e-08 63.5 144 27.1


User provided reference genes

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