Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 1.8e-306 1055.0 528 100.0
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 1.5e-244 849.4 528 83.0
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 1.7e-235 819.3 532 79.9
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 3.0e-192 675.6 501 67.1
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.0e-187 660.6 464 69.8
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 8.5e-187 657.5 527 64.3
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 2.1e-185 652.9 499 66.3
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 3.6e-185 652.1 506 67.2
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 1.8e-184 649.8 513 66.9
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 3.3e-183 645.6 443 73.4
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 2.8e-182 642.5 456 69.7
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 7.7e-180 634.4 463 69.5
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 5.5e-178 628.2 495 64.0
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.6e-177 626.7 467 68.5
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 2.0e-172 609.8 499 61.5
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 5.0e-171 605.1 472 67.2
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 2.5e-170 602.8 460 64.6
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 9.8e-167 590.9 502 59.0
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.1e-165 585.5 502 59.0
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.6e-164 583.6 502 58.8
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 3.5e-164 582.4 466 61.4
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.3e-163 580.5 464 61.9
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 6.6e-163 578.2 464 61.4
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 1.1e-162 577.4 464 60.6
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.5e-162 577.0 512 57.8
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 5.6e-162 575.1 469 62.7
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 1.0e-160 570.9 464 60.6
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.2e-158 563.1 520 57.1
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 1.3e-134 484.2 479 54.3
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 6.0e-132 475.3 311 74.3
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 5.3e-112 409.1 465 46.0
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 1.1e-109 401.4 484 44.2
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 3.7e-105 386.3 501 43.1
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 2.1e-100 370.5 257 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 3.0e-99 366.7 400 49.5
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 1.1e-93 348.2 236 71.6
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 1.1e-90 338.2 445 43.1
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.0e-66 257.7 319 51.7
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 8.3e-65 252.3 225 60.4
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 2.7e-63 247.3 187 62.0
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-62 243.4 236 56.4
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 9.4e-61 238.8 300 43.3
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 9.4e-61 238.8 300 43.3
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 3.4e-58 230.3 519 33.1
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 5.7e-58 229.6 181 65.2
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.0e-54 216.5 187 59.9
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 9.5e-53 212.2 264 49.2
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.4e-51 208.4 259 49.4
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.5e-50 202.6 182 56.6
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-49 201.8 182 57.1
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.4e-48 196.4 182 56.0
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.8e-47 192.6 174 56.9
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.0e-46 192.2 179 57.0
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.0e-43 182.2 167 55.7
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 2.6e-42 177.6 240 43.8
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 7.8e-39 166.0 158 53.8
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.3e-37 160.2 142 54.2
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.8e-36 157.5 142 52.8
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-35 155.6 180 47.2
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.9e-33 147.5 121 60.3
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.3e-25 122.1 123 54.5
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 3.7e-25 120.6 359 29.5
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 8.3e-25 119.4 113 55.8
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 1.7e-22 111.7 272 32.7
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.5e-21 107.8 128 44.5
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 3.6e-20 104.0 69 63.8
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 4.7e-20 103.6 202 33.2
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 8.9e-19 99.4 172 37.8
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.2e-18 99.0 75 65.3
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.4e-11 75.5 136 36.8
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 1.8e-11 75.1 120 40.0
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.0e-11 73.9 141 38.3
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 1.5e-10 72.0 102 37.3
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 2.0e-10 71.6 56 64.3
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.4e-08 65.5 76 40.8
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 1.0e-06 59.3 85 35.3


User provided reference genes

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