Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.5e-195 685.3 343 100.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.3e-180 635.6 397 83.6
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.3e-159 563.9 343 83.1
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 3.5e-149 531.9 332 80.4
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.3e-148 529.3 340 79.1
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 3.0e-148 528.9 337 79.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 3.3e-147 525.4 326 80.1
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.1e-145 518.8 336 76.8
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.0e-145 518.5 335 76.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 8.9e-145 517.3 338 78.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-144 516.9 336 76.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.0e-144 516.2 336 75.9
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-144 515.4 335 76.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.9e-144 513.8 336 75.6
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.4e-143 510.8 333 75.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 8.4e-143 510.8 323 80.2
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 4.6e-141 505.0 337 74.5
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 6.0e-141 504.6 337 75.4
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.3e-140 503.4 338 75.7
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.3e-140 503.4 313 80.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 6.6e-140 501.1 328 76.5
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 8.7e-140 500.7 310 81.3
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.5e-139 499.2 345 74.5
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.3e-139 498.8 347 74.4
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 5.6e-139 498.0 337 75.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.2e-138 496.9 353 73.9
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.6e-138 496.5 341 74.8
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.6e-138 496.5 353 73.7
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.7e-138 495.0 338 74.6
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 6.2e-138 494.6 344 74.1
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 8.1e-138 494.2 331 74.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.8e-137 493.0 353 73.1
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.4e-137 492.7 337 75.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.9e-135 485.7 341 73.0
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.9e-135 485.7 342 73.7
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.4e-134 483.4 309 79.0
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.9e-134 483.0 341 72.4
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 9.3e-134 480.7 341 72.4
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 7.8e-133 477.6 286 81.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.0e-132 477.2 344 70.6
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.0e-132 477.2 291 81.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.0e-132 477.2 286 79.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.3e-132 476.9 341 71.8
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 6.6e-132 474.6 286 80.1
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.1e-131 473.8 323 73.4
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.5e-131 472.6 422 61.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 4.3e-131 471.9 334 72.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 5.6e-131 471.5 293 78.2
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.8e-130 468.4 319 72.1
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 9.0e-129 464.2 324 72.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.5e-128 461.8 332 69.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 5.8e-128 461.5 343 69.7
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 9.9e-128 460.7 322 72.4
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.9e-127 458.4 334 68.9
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.9e-127 458.4 322 70.5
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 4.9e-127 458.4 379 64.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 6.4e-127 458.0 336 71.1
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 6.4e-127 458.0 338 68.0
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.4e-126 456.1 284 76.1
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 3.2e-126 455.7 323 71.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 3.2e-126 455.7 341 69.5
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 4.2e-126 455.3 334 68.3
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 4.2e-126 455.3 323 70.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 4.2e-126 455.3 340 67.6
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 9.3e-126 454.1 285 75.8
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.6e-125 453.4 324 70.1
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.7e-125 452.6 326 69.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.7e-125 452.6 289 75.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 3.5e-125 452.2 323 69.0
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 4.6e-125 451.8 326 69.9
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 7.9e-125 451.1 338 68.9
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.3e-124 450.3 325 69.8
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.8e-124 449.9 337 67.7
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 6.7e-124 448.0 326 69.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 9.6e-123 444.1 331 68.9
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.3e-122 443.7 342 69.0
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.1e-121 439.1 314 71.0
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.0e-121 438.7 302 71.5
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 5.3e-121 438.3 355 63.7
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 7.6e-120 434.5 259 79.9
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 9.9e-120 434.1 282 74.8
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.3e-119 433.7 288 72.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.1e-118 430.6 309 69.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-115 420.6 318 67.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.6e-114 416.8 279 74.2
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.7e-114 415.6 328 65.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.2e-114 414.5 444 52.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.4e-113 412.9 318 70.1
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 5.5e-110 401.7 314 64.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 8.7e-108 394.4 278 66.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 8.2e-106 387.9 229 80.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.4e-105 386.3 311 64.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.5e-104 383.6 331 62.5
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.8e-98 362.8 362 50.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 9.1e-97 357.8 328 61.3
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 9.7e-91 337.8 303 53.8
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 6.3e-90 335.1 306 61.1
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 4.5e-88 328.9 275 59.6
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.5e-86 322.0 341 49.0
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 8.8e-84 314.7 291 58.1
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 7.0e-81 305.1 265 54.3
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.4e-73 280.8 156 81.4
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 2.1e-69 266.9 207 67.1
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.8e-67 258.1 147 84.4
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.5e-59 234.2 134 81.3
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.5e-59 234.2 163 73.0
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.2e-57 224.9 135 78.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.7e-56 223.4 283 41.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.4e-51 206.5 283 44.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.6e-46 189.1 136 61.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.4e-41 174.5 112 76.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 7.8e-32 142.1 316 30.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.7e-31 141.0 256 36.7
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.6e-29 134.4 308 33.4
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 6.0e-16 89.4 104 48.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 7.9e-16 89.0 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.6e-14 82.8 54 66.7
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.2e-10 70.9 80 55.0


User provided reference genes

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