Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 1.7e-52 209.1 109 100.0
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 2.2e-41 172.2 109 88.1
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 4.4e-21 104.8 111 59.5
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 6.3e-20 100.9 109 52.3
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 5.4e-19 97.8 109 53.2
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 2.0e-18 95.9 80 65.0
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.5e-18 94.7 86 53.5
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.5e-18 94.7 86 53.5
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 1.6e-15 86.3 111 51.4
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 2.1e-15 85.9 114 51.8
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 2.1e-15 85.9 110 51.8
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 1.8e-14 82.8 111 52.3
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 2.3e-14 82.4 111 51.4
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 3.0e-14 82.0 75 58.7
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 2.0e-13 79.3 64 57.8
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 2.0e-13 79.3 109 43.1
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 4.4e-13 78.2 72 58.3
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 7.5e-13 77.4 108 42.6
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 9.8e-13 77.0 74 55.4
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 3.7e-12 75.1 110 48.2
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 3.7e-12 75.1 86 50.0
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 3.7e-12 75.1 109 45.0
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 4.9e-12 74.7 110 47.3
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 8.3e-12 73.9 112 44.6
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 2.4e-11 72.4 92 45.7
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 7.0e-11 70.9 81 44.4
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 7.0e-11 70.9 81 44.4
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 9.2e-11 70.5 109 43.1
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 9.2e-11 70.5 109 43.1
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 9.2e-11 70.5 99 45.5
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 2.7e-10 68.9 109 45.0
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 6.0e-10 67.8 100 41.0
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 6.0e-10 67.8 95 41.1
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.0e-09 67.0 110 40.9
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 3.0e-09 65.5 112 37.5
Nn7g37755 Nelumbo nucifera HOM05D008210 ORTHO05D010078 3.0e-09 65.5 57 56.1
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 5.0e-09 64.7 109 38.5
MELO3C010908.2 Cucumis melo HOM05D022138 ORTHO05D010078 6.6e-09 64.3 71 46.5
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 1.1e-08 63.5 83 42.2
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 1.1e-08 63.5 92 45.7
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 1.1e-08 63.5 77 46.8
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 1.5e-08 63.2 81 43.2
Nn6g32154 Nelumbo nucifera HOM05D008210 ORTHO05D010078 1.5e-08 63.2 46 63.0
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 1.9e-08 62.8 118 38.1
AL1G53960 Arabidopsis lyrata HOM05D015684 ORTHO05D010078 3.3e-08 62.0 61 44.3
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 3.3e-08 62.0 88 43.2
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 3.3e-08 62.0 84 40.5
Carub.0001s3639 Capsella rubella HOM05D015684 ORTHO05D010078 5.6e-08 61.2 87 42.5
ClCG08G015480 Citrullus lanatus HOM05D022138 ORTHO05D010078 7.3e-08 60.8 88 40.9
Nn4g22836 Nelumbo nucifera HOM05D008210 ORTHO05D010078 7.3e-08 60.8 64 48.4
BcaB04g17510 Brassica carinata HOM05D015684 ORTHO05D010078 1.2e-07 60.1 90 45.6
A08p05560 Brassica napus HOM05D015684 ORTHO05D010078 1.2e-07 60.1 87 43.7
CARHR037250 Cardamine hirsuta HOM05D015684 ORTHO05D010078 2.1e-07 59.3 77 42.9
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 2.1e-07 59.3 69 46.4
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 4.7e-07 58.2 111 38.7
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 4.7e-07 58.2 116 38.8
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 4.7e-07 58.2 110 39.1
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 4.7e-07 58.2 69 44.9
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 4.7e-07 58.2 108 38.9
BraA08t32560Z Brassica rapa HOM05D015684 ORTHO05D010078 6.2e-07 57.8 87 42.5
CsaV3_2G028310 Cucumis sativus L. HOM05D022138 ORTHO05D010078 6.2e-07 57.8 75 42.7
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 6.2e-07 57.8 71 49.3
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 8.0e-07 57.4 83 42.2
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 8.0e-07 57.4 113 37.2
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 1.1e-06 57.0 102 34.3
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 1.4e-06 56.6 99 38.4
BcaC07g37206 Brassica carinata HOM05D015684 ORTHO05D010078 1.4e-06 56.6 106 37.7
C08p06120 Brassica napus HOM05D015684 ORTHO05D010078 3.1e-06 55.5 87 41.4
BolC8t47395H Brassica oleracea HOM05D015684 ORTHO05D010078 3.1e-06 55.5 87 41.4
Migut.N02682 Erythranthe guttata HOM05D008210 ORTHO05D010078 3.1e-06 55.5 48 56.2
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 4.0e-06 55.1 113 36.3
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 5.2e-06 54.7 71 43.7
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 8.9e-06 53.9 115 35.7


User provided reference genes

Program Settings