Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.1e-245 852.8 417 100.0
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.3e-219 766.1 418 91.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 2.5e-189 665.6 419 77.6
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.0e-178 629.4 541 62.1
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 6.5e-166 587.8 418 69.1
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.5e-162 576.6 413 67.3
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.6e-162 575.9 416 69.0
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.7e-161 573.2 414 68.6
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 8.3e-161 570.9 418 68.2
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 3.5e-159 565.5 420 67.1
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 7.3e-157 557.8 412 66.7
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 8.0e-156 554.3 421 63.4
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.4e-155 553.5 414 64.7
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.5e-154 550.1 418 63.6
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.0e-154 549.7 414 64.3
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 3.4e-154 548.9 416 63.7
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.7e-153 546.6 418 65.3
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 4.9e-153 545.0 418 68.4
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 6.4e-153 544.7 414 64.3
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.1e-152 543.9 415 66.7
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.4e-152 543.5 414 64.5
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.6e-151 540.0 414 66.4
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 5.0e-150 535.0 447 58.6
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.5e-149 532.7 410 62.0
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 4.3e-149 531.9 422 65.4
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 2.1e-148 529.6 409 62.1
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.4e-147 526.9 420 61.0
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 3.1e-147 525.8 417 63.3
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 3.1e-147 525.8 409 61.6
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 6.8e-147 524.6 423 63.1
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 2.0e-146 523.1 468 59.2
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.1e-144 517.3 417 60.2
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.4e-144 516.9 418 60.3
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 1.9e-144 516.5 415 60.2
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 3.2e-144 515.8 418 62.9
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 6.0e-143 511.5 416 59.1
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 7.8e-143 511.1 421 59.4
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 1.0e-142 510.8 432 61.1
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.3e-142 510.4 423 60.0
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.9e-142 508.8 424 59.9
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 6.6e-142 508.1 421 57.5
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 6.6e-142 508.1 423 61.7
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 9.5e-141 504.2 423 60.0
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.2e-140 503.8 423 59.8
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 2.1e-140 503.1 396 62.4
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.7e-140 501.9 415 61.2
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.1e-139 500.7 428 60.7
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.1e-139 500.7 415 60.5
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.1e-139 499.2 436 58.3
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 2.6e-138 496.1 423 59.1
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 5.8e-138 495.0 433 55.4
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 9.8e-138 494.2 418 59.3
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 9.8e-138 494.2 421 59.6
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 4.9e-137 491.9 428 58.9
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.2e-136 489.2 415 60.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 4.1e-136 488.8 455 55.6
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 9.2e-136 487.6 423 58.2
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.1e-135 486.5 419 57.5
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 6.0e-135 485.0 416 59.1
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.7e-134 483.4 414 59.9
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 3.9e-134 482.3 425 59.1
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 6.6e-134 481.5 378 61.9
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.6e-134 481.5 441 55.3
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.6e-134 481.5 441 55.3
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 1.6e-132 476.9 418 56.2
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 2.3e-131 473.0 416 57.0
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.3e-131 473.0 369 64.0
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 4.0e-131 472.2 423 56.7
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 5.2e-131 471.9 421 56.1
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 8.9e-131 471.1 421 56.1
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.3e-129 467.2 434 53.5
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.7e-129 466.8 420 57.1
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 1.1e-128 464.2 426 55.2
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.0e-126 457.6 428 57.2
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 3.0e-126 456.1 422 55.9
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 5.1e-126 455.3 418 53.6
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 4.7e-124 448.7 377 58.9
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 6.2e-124 448.4 413 52.8
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 6.6e-118 428.3 430 54.0
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.1e-115 421.0 406 53.2
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 1.4e-115 420.6 379 57.8
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 9.0e-115 417.9 337 59.6
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 4.5e-114 415.6 435 52.2
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 4.9e-113 412.1 440 49.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.6e-111 407.1 432 48.1
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 7.9e-111 404.8 336 58.6
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.5e-109 400.6 352 63.1
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.8e-107 393.7 349 56.4
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 4.9e-105 385.6 401 50.4
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.5e-103 379.4 419 46.3
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.1e-93 347.8 338 58.0
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 5.7e-93 345.5 392 47.2
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.8e-92 343.2 432 43.5
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.8e-91 340.5 432 44.0
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.3e-84 317.8 352 48.6
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.7e-84 316.2 355 45.6
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.5e-82 310.8 306 51.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.1e-80 304.7 291 49.5
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 2.7e-63 246.9 223 60.5
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.0e-62 245.0 161 71.4
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 6.5e-57 225.7 190 54.2
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 2.0e-53 214.2 225 51.1
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 4.5e-50 203.0 392 31.9
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 6.3e-44 182.6 225 42.2
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.1e-39 167.5 159 61.0
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 6.2e-31 139.4 153 51.6
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 3.0e-25 120.6 80 70.0
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 3.9e-25 120.2 166 45.8
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 4.3e-16 90.1 64 64.1
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 4.4e-13 80.1 192 28.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 6.4e-12 76.3 92 53.3
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 4.6e-10 70.1 53 60.4
BolC8t49566H Brassica oleracea HOM05D040593 ORTHO05D033422 4.0e-06 57.0 34 70.6
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 9.0e-06 55.8 49 55.1


User provided reference genes

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