Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.0e-85 320.1 168 100.0
Cfa012649 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.4e-82 309.7 168 89.9
Cfa021206 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.1e-82 308.5 168 89.3
Cfa012336 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.0e-81 305.8 168 89.3
Cfa019640 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.5e-70 268.5 168 86.3
Cfa008536 Carpinus fangiana HOM05D011273 ORTHO05D013289 8.4e-64 247.3 169 69.2
Cfa010712 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.2e-63 245.4 169 69.2
Cfa008487 Carpinus fangiana HOM05D011273 ORTHO05D013289 7.4e-60 234.2 169 66.3
Cfa005445 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.3e-51 204.5 175 58.9
Cfa002369 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.1e-46 189.5 168 67.3
Cfa010107 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.5e-33 145.6 166 43.4
Cfa022968 Carpinus fangiana HOM05D011273 ORTHO05D013289 7.7e-33 144.4 166 43.4
Cfa012337 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.7e-24 116.7 59 96.6
Cfa002120 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.6e-16 88.2 118 37.3
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-09 67.0 76 39.5
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 4.6e-09 65.5 84 40.5
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 5.9e-09 65.1 154 27.3
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 7.8e-09 64.7 108 31.5
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 2.3e-08 63.2 69 40.6
Cfa005677 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.9e-08 62.4 94 36.2
Hma1.2p1_0012F.1_g007535 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.6e-08 61.6 86 34.9
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 8.6e-08 61.2 109 31.2
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.9e-07 60.1 71 36.6
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.9e-07 60.1 80 33.8
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.5e-07 59.7 93 35.5
VMungo0647G2310 Vigna mungo HOM05D008589 ORTHO05D010715 3.3e-07 59.3 116 26.7
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.3e-07 58.9 71 38.0
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-07 58.9 102 27.5
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-07 58.9 101 27.7
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-07 58.9 90 32.2
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-07 58.5 65 41.5
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-07 58.5 57 45.6
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 58.5 73 35.6
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 58.5 73 35.6
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 5.6e-07 58.5 60 41.7
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 5.6e-07 58.5 73 32.9
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 5.6e-07 58.5 90 34.4
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 7.3e-07 58.2 78 34.6
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.5e-07 57.8 77 36.4
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.5e-07 57.8 61 39.3
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 9.5e-07 57.8 90 34.4
Hma1.2p1_0257F.1_g103490 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 57.4 71 38.0
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 57.4 61 39.3
Glyma.01G130300 Glycine max HOM05D001383 ORTHO05D000309 1.6e-06 57.0 88 31.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 57 45.6
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 58 41.4
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 78 35.9
Medtr8g466420 Medicago truncatula HOM05D009039 ORTHO05D011159 1.6e-06 57.0 80 37.5
VMungo1298G0001 Vigna mungo HOM05D008573 ORTHO05D009911 1.6e-06 57.0 92 29.3
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-06 56.6 100 31.0
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 2.1e-06 56.6 71 31.0
Nitab4.5_0000216g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 2.1e-06 56.6 69 34.8
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 32.9
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 32.9
VMungo1215G1066 Vigna mungo HOM05D008573 ORTHO05D009911 2.1e-06 56.6 111 31.5
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.8e-06 56.2 97 37.1
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 2.8e-06 56.2 70 35.7
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 2.8e-06 56.2 72 36.1
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 2.8e-06 56.2 79 30.4
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 2.8e-06 56.2 79 30.4
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-06 56.2 73 34.2
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-06 56.2 56 39.3
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 2.8e-06 56.2 83 33.7
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.6e-06 55.8 54 44.4
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.8 78 33.3
SGA_v2.0_scaffold22G09703 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.8 105 29.5
SGA_v2.0_scaffold43G16251 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.8 73 32.9
AUR62006272 Chenopodium quinoa HOM05D008388 ORTHO05D000309 4.7e-06 55.5 61 39.3
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 4.7e-06 55.5 82 35.4
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 4.7e-06 55.5 81 30.9
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.7e-06 55.5 70 32.9
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 6.2e-06 55.1 44 50.0
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 61 39.3
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 67 35.8
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 72 34.7
SGA_v2.0_scaffold5G03034 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-06 55.1 73 32.9
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 8.0e-06 54.7 100 33.0
CAN.G1005.18 Capsicum annuum HOM05D011038 ORTHO05D004172 8.0e-06 54.7 73 39.7
HanXRQChr03g0077471 Helianthus annuus HOM05D001383 ORTHO05D000309 8.0e-06 54.7 90 32.2
QL11p007191 Quercus lobata HOM05D000005 ORTHO05D000012 8.0e-06 54.7 69 34.8
VMungo1383G2965 Vigna mungo HOM05D008589 ORTHO05D010715 8.0e-06 54.7 98 28.6


User provided reference genes

Program Settings