Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.4e-17 92.4 67 100.0
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.1e-14 82.8 67 70.1
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.4e-14 82.4 67 71.6
Cfa007988 Carpinus fangiana HOM05D002873 ORTHO05D002978 5.3e-09 63.9 90 50.0
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 65.2
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 61.2
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 70.1
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 70.1
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.5e-08 60.8 67 64.2
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 1.0e-07 59.7 67 71.6
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 75.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-07 59.3 66 51.5
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-07 59.3 66 51.5
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 50.7
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 50.0
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 51.5
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 53.7
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 50.0
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 3.8e-07 57.8 67 49.3
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 4.9e-07 57.4 66 50.0
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 4.9e-07 57.4 66 69.7
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 66.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 50.0
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 8.4e-07 56.6 67 65.7
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 48.5
PGR042G1695 Punica granatum HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 74.6
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 61.2
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 68.7
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 48.5
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 2.5e-06 55.1 63 61.9
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 54.5
Haze_14086 Corylus avellana HOM05D002873 ORTHO05D002978 3.2e-06 54.7 88 44.3
Gohir.A11G167800 Gossypium hirsutum HOM05D042116 ORTHO05D002978 3.2e-06 54.7 67 65.7
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.2e-06 54.7 69 52.2
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 68.2
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 3.2e-06 54.7 67 58.2
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 48.5
Nitab4.5_0000612g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 4.2e-06 54.3 64 75.0
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 59.1
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
Ca_06720_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 5.5e-06 53.9 69 66.7
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 63.6
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 70.1
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 65.7
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 55.2
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 63.6
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 46.3
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 67.2
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 55.2
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
Lsat_1_v5_gn_2_86260 Lactuca sativa HOM05D002873 ORTHO05D002978 9.3e-06 53.1 67 61.2
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 9.3e-06 53.1 67 56.7
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 9.3e-06 53.1 67 67.2


User provided reference genes

Program Settings