Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.5e-214 748.4 361 100.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.7e-176 622.1 359 81.6
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 7.9e-176 620.5 330 88.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 9.6e-174 613.6 508 65.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.0e-171 605.9 366 79.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 7.6e-171 604.0 353 80.7
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.7e-170 602.8 356 77.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 4.2e-169 598.2 351 78.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 5.5e-169 597.8 456 66.7
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 5.5e-169 597.8 357 80.4
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.7e-168 595.5 360 77.5
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.9e-167 591.7 356 79.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.6e-165 586.3 357 77.6
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.6e-165 586.3 359 77.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.4e-164 583.2 351 76.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.5e-163 579.7 353 76.8
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.0e-163 579.3 361 75.3
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.5e-163 578.2 352 77.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.5e-163 578.2 358 76.0
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.9e-163 577.8 360 75.0
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 7.7e-163 577.4 354 76.8
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.0e-162 577.0 353 75.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.3e-162 576.6 351 75.8
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.2e-162 575.9 353 74.8
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.1e-161 573.5 353 74.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.5e-161 572.4 355 75.8
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.2e-161 572.0 353 74.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 7.9e-160 567.4 353 73.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.0e-159 565.5 354 73.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 3.0e-159 565.5 352 73.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 8.8e-159 563.9 357 73.7
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.1e-158 563.5 357 74.2
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 2.0e-158 562.8 350 72.9
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 4.3e-158 561.6 354 73.4
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.7e-157 559.7 359 72.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.1e-156 557.0 352 71.9
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 4.1e-156 555.1 350 72.6
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.5e-155 551.6 356 71.9
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-154 550.1 416 65.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-154 550.1 416 65.6
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.7e-154 549.7 351 72.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 5.0e-154 548.1 352 71.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.1e-153 547.0 353 72.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.4e-153 546.6 351 71.5
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.5e-153 544.7 353 72.2
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 7.2e-153 544.3 384 66.9
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 6.1e-152 541.2 360 70.3
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 3.0e-151 538.9 352 72.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.6e-150 535.8 354 70.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.6e-147 525.8 364 69.0
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.6e-144 515.4 352 68.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 8.8e-143 510.8 352 66.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.4e-140 503.4 353 69.1
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 7.0e-140 501.1 358 65.1
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.2e-139 500.4 352 67.0
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 2.7e-139 499.2 323 71.8
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 6.5e-138 494.6 362 65.2
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.5e-137 493.4 352 66.2
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 3.0e-135 485.7 355 65.9
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.0e-135 485.7 355 65.9
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.8e-135 484.6 355 65.6
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.5e-129 466.1 355 65.1
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 6.8e-127 458.0 462 52.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 3.0e-114 416.0 286 67.8
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.6e-99 365.5 291 61.9
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 4.0e-95 352.4 193 81.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 4.0e-95 352.4 357 48.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 5.4e-92 342.0 239 68.2
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.0e-90 337.8 197 77.2
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.9e-85 318.9 358 43.9
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.4e-85 318.5 343 50.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 4.8e-80 302.4 215 65.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 8.7e-66 255.0 162 71.0
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.5e-65 254.2 235 52.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 7.4e-65 251.9 147 74.1
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 9.0e-63 245.0 249 52.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.3e-58 231.1 160 71.9
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 6.3e-56 222.2 140 70.7
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.0e-53 214.9 357 34.2
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.8e-42 177.6 422 29.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 2.0e-41 174.1 378 31.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 3.3e-41 173.3 116 72.4
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.2e-40 170.6 128 64.8
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 9.1e-31 138.7 103 65.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.9e-30 136.0 74 78.4
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.0e-29 135.2 102 64.7
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 8.5e-29 132.1 109 55.0
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-27 128.3 113 58.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.1e-27 127.5 70 77.1
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 6.1e-27 125.9 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 6.1e-27 125.9 70 72.9
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.1e-27 125.9 105 54.3
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 7.0e-23 112.5 118 51.7
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-22 111.3 69 76.8
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.6e-22 111.3 288 29.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-22 110.9 69 75.4
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.9e-22 109.4 69 75.4
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-21 107.8 69 75.4
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.6e-19 101.3 74 63.5
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.0e-19 99.0 160 40.6
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.6e-17 94.0 83 51.8
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.4e-17 93.2 87 57.5
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-16 91.3 53 69.8
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.5e-13 79.3 54 63.0
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 4.7e-11 73.2 176 33.5
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 6.1e-11 72.8 96 42.7
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 9.8e-09 65.5 57 54.4
Cpa.g.sc21.203 Carica papaya HOM05D007327 ORTHO05D118724 1.2e-06 58.5 40 57.5


User provided reference genes

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