Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018300 Carpinus fangiana HOM05D021884 ORTHO05D000020 2.3e-183 645.6 357 100.0
Haze_17790 Corylus avellana HOM05D021884 ORTHO05D000020 5.8e-171 604.4 358 94.1
QL02p037620 Quercus lobata HOM05D000245 ORTHO05D000020 5.6e-57 225.7 477 43.6
QL02p038592 Quercus lobata HOM05D000245 ORTHO05D000020 1.3e-53 214.5 475 42.5
Duzib116G0268 Durio zibethinus HOM05D000245 ORTHO05D000020 3.2e-36 156.8 469 35.8
Dinv41051 Davidia involucrata HOM05D000245 ORTHO05D000020 2.1e-35 154.1 461 36.9
Potri.005G195000 Populus trichocarpa HOM05D000245 ORTHO05D000020 4.3e-33 146.4 479 34.2
CiPaw.15G014100 Carya illinoinensis HOM05D000245 ORTHO05D000020 1.6e-32 144.4 306 42.2
Manes.02G182000 Manihot esculenta HOM05D000245 ORTHO05D000020 1.2e-30 138.3 491 33.8
Potri.002G065600 Populus trichocarpa HOM05D000245 ORTHO05D000020 1.2e-30 138.3 493 33.3
Dinv25886 Davidia involucrata HOM05D000245 ORTHO05D000020 1.5e-30 137.9 454 35.0
GSVIVG01034563001 Vitis vinifera HOM05D000245 ORTHO05D000020 3.4e-30 136.7 414 36.2
Duzib041G0115 Durio zibethinus HOM05D000245 ORTHO05D000020 7.6e-30 135.6 465 33.5
Thecc.08G156800 Theobroma cacao HOM05D000245 ORTHO05D000020 1.7e-29 134.4 470 35.1
CiPaw.16G009600 Carya illinoinensis HOM05D000245 ORTHO05D000020 8.4e-29 132.1 363 38.8
Duzib093G0003 Durio zibethinus HOM05D000245 ORTHO05D000020 8.4e-29 132.1 474 35.0
Sabra02G0052300 Salix brachista HOM05D000245 ORTHO05D000020 3.2e-28 130.2 490 32.7
TAR628G0091 Trochodendron aralioides HOM05D000245 ORTHO05D000020 3.2e-28 130.2 458 34.5
Sabra05G0148500 Salix brachista HOM05D000245 ORTHO05D000020 4.2e-28 129.8 485 32.4
TAR381G0642 Trochodendron aralioides HOM05D000245 ORTHO05D000020 3.5e-27 126.7 461 33.8
TAR381G0041 Trochodendron aralioides HOM05D000245 ORTHO05D000020 4.6e-27 126.3 458 34.3
Gohir.A05G244600 Gossypium hirsutum HOM05D000245 ORTHO05D000020 3.9e-26 123.2 461 32.3
Gohir.D05G245600 Gossypium hirsutum HOM05D000245 ORTHO05D000020 6.7e-26 122.5 458 32.3
Gorai.009G255400 Gossypium raimondii HOM05D000245 ORTHO05D000020 6.7e-26 122.5 458 32.1
MD05G1030800 Malus domestica HOM05D000245 ORTHO05D000020 1.5e-25 121.3 487 33.7
Manes.18G093800 Manihot esculenta HOM05D000245 ORTHO05D000020 9.0e-23 112.1 424 34.9
Prupe.8G037900 Prunus persica HOM05D021884 ORTHO05D000020 1.2e-22 111.7 471 33.5
Cpa.g.sc49.94 Carica papaya HOM05D000245 ORTHO05D000020 2.0e-22 110.9 476 33.2
Nn5g28797 Nelumbo nucifera HOM05D000245 ORTHO05D000020 2.6e-22 110.5 393 34.1
COL.COLO4_38003 Corchorus olitorius HOM05D021884 ORTHO05D000020 1.3e-21 108.2 424 36.3
Gohir.A06G111100 Gossypium hirsutum HOM05D000245 ORTHO05D000020 3.9e-18 96.7 426 31.9
Gorai.010G131500 Gossypium raimondii HOM05D000245 ORTHO05D000020 6.7e-18 95.9 457 31.9
CSS0049714 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 8.7e-18 95.5 502 30.1
Lalb_Chr19g0130181 Lupinus albus HOM05D000245 ORTHO05D000020 9.7e-17 92.0 195 41.5
Gohir.D06G115000 Gossypium hirsutum HOM05D000245 ORTHO05D000020 1.6e-16 91.3 457 31.9
Glyma.16G164800 Glycine max HOM05D000245 ORTHO05D000020 2.4e-15 87.4 496 28.4
Psat1g101120 Pisum sativum HOM05D000245 ORTHO05D000020 4.1e-15 86.7 449 30.3
Nn1g06031 Nelumbo nucifera HOM05D000245 ORTHO05D000020 6.9e-15 85.9 455 29.0
MBI09_g13288_MAGBIO Magnolia biondii HOM05D000245 ORTHO05D000020 2.6e-14 84.0 462 30.3
Lalb_Chr01g0009751 Lupinus albus HOM05D000245 ORTHO05D000020 5.9e-14 82.8 152 43.4
Rhsim11G0086800 Rhododendron simsii HOM05D000245 ORTHO05D000020 5.9e-14 82.8 408 31.6
CSS0008086 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 1.0e-13 82.0 407 31.0
Hma1.2p1_0081F.1_g042450 Hydrangea macrophylla HOM05D000245 ORTHO05D000020 1.0e-13 82.0 426 31.2
TAR625G1419 Trochodendron aralioides HOM05D000245 ORTHO05D000020 2.9e-13 80.5 447 30.9
Medtr6g037610 Medicago truncatula HOM05D000245 ORTHO05D000020 3.8e-13 80.1 448 29.2
Nitab4.5_0000423g0060 Nicotiana tabacum HOM05D000245 ORTHO05D000020 3.2e-12 77.0 487 29.4
Peaxi162Scf00079g02119 Petunia axillaris HOM05D000245 ORTHO05D000020 1.2e-11 75.1 434 32.3
MD10G1032000 Malus domestica HOM05D000245 ORTHO05D000020 2.1e-11 74.3 476 29.8
RcHm_v2.0_Chr6g0274591 Rosa chinensis HOM05D000245 ORTHO05D000020 6.1e-11 72.8 483 28.2
SalBow7G0146 Salvia bowleyana HOM05D000245 ORTHO05D000020 7.9e-11 72.4 456 29.8
SalBow7G3459 Salvia bowleyana HOM05D000245 ORTHO05D000020 7.9e-11 72.4 456 29.8
Nitab4.5_0002230g0030 Nicotiana tabacum HOM05D000245 ORTHO05D000020 1.0e-10 72.0 198 35.4
TPR.G28005 Trifolium pratense HOM05D000245 ORTHO05D000020 2.3e-10 70.9 133 42.1
CAN.G264.14 Capsicum annuum HOM05D000245 ORTHO05D000020 3.0e-10 70.5 460 32.0
Cc10_g15100 Coffea canephora HOM05D000245 ORTHO05D000020 3.0e-10 70.5 167 44.3
Phvul.007G082000 Phaseolus vulgaris HOM05D000245 ORTHO05D000020 3.9e-10 70.1 113 44.2
Ca_28474_v3 Cicer arietinum L. HOM05D000245 ORTHO05D000020 6.7e-10 69.3 223 34.1
Phvul.004G092100 Phaseolus vulgaris HOM05D000245 ORTHO05D000020 6.7e-10 69.3 479 28.4
TWI34G0399 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 1.5e-09 68.2 396 30.3
Gorai.005G078100 Gossypium raimondii HOM05D000245 ORTHO05D000020 1.9e-09 67.8 340 32.9
Psat6g191920 Pisum sativum HOM05D000245 ORTHO05D000020 1.9e-09 67.8 158 40.5
Gohir.D02G069000 Gossypium hirsutum HOM05D000245 ORTHO05D000020 2.5e-09 67.4 341 32.8
Nn1g06033 Nelumbo nucifera HOM05D000245 ORTHO05D000020 2.5e-09 67.4 403 32.3
Solyc04g071770.3 Solanum lycopersicum HOM05D000245 ORTHO05D000020 2.5e-09 67.4 384 27.3
Glyma.10G223200 Glycine max HOM05D000245 ORTHO05D000020 3.3e-09 67.0 162 41.4
PGSC0003DMG400018803 Solanum tuberosum HOM05D000245 ORTHO05D000020 4.3e-09 66.6 437 30.7
Lj7C377T9 Lonicera japonica HOM05D000245 ORTHO05D000020 5.7e-09 66.2 345 30.7
QL10p059399 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-08 65.1 67 59.7
FAN15G2383 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.7e-08 64.7 485 27.4
TWI60G0044 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 1.7e-08 64.7 89 46.1
Glyma.20G168500 Glycine max HOM05D000245 ORTHO05D000020 2.2e-08 64.3 156 40.4
Oeu061436.1 Olea europaea HOM05D000245 ORTHO05D000020 2.2e-08 64.3 455 29.2
Ca_13204_v3 Cicer arietinum L. HOM05D021884 ORTHO05D000020 2.8e-08 63.9 130 40.8
Gohir.A02G063300 Gossypium hirsutum HOM05D000245 ORTHO05D000020 2.8e-08 63.9 341 32.3
FvH4_2g13240 Fragaria vesca HOM05D000245 ORTHO05D000020 3.7e-08 63.5 486 26.7
FAN27G0046 Fragaria x ananassa HOM05D000245 ORTHO05D000020 6.3e-08 62.8 486 25.9
FAN24G1440 Fragaria x ananassa HOM05D000245 ORTHO05D000020 8.2e-08 62.4 484 27.1
TPR.G17030 Trifolium pratense HOM05D000245 ORTHO05D000020 8.2e-08 62.4 142 40.8
Lsat_1_v5_gn_1_5340 Lactuca sativa HOM05D000245 ORTHO05D000020 1.1e-07 62.0 437 27.7
Medtr1g098460 Medicago truncatula HOM05D000245 ORTHO05D000020 1.8e-07 61.2 195 34.4
Sc02g0003880 Simmondsia chinensis HOM05D000245 ORTHO05D000020 4.1e-07 60.1 170 36.5
Oeu057407.2 Olea europaea HOM05D000245 ORTHO05D000020 5.3e-07 59.7 411 26.5
PGSC0003DMG400006369 Solanum tuberosum HOM05D000245 ORTHO05D000020 6.9e-07 59.3 370 27.3
TWI32G0771 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 6.9e-07 59.3 424 26.9
Lj2g0001461 Lotus japonicus HOM05D000245 ORTHO05D000020 9.1e-07 58.9 455 26.6
Ciclev10001138m.g Citrus clementina HOM05D000245 ORTHO05D000020 1.2e-06 58.5 188 35.6
HanXRQChr02g0044641 Helianthus annuus HOM05D000245 ORTHO05D000020 1.2e-06 58.5 193 34.7
Sopen12g029210 Solanum pennellii HOM05D000245 ORTHO05D000020 2.0e-06 57.8 386 33.4
CsaV3_6G005100 Cucumis sativus L. HOM05D000245 ORTHO05D000020 2.6e-06 57.4 135 43.7
Glyma.02G080200 Glycine max HOM05D000245 ORTHO05D000020 3.4e-06 57.0 485 27.2


User provided reference genes

Program Settings