Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.2e-49 199.5 102 100.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 5.3e-45 184.1 103 92.2
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.2e-42 174.5 101 87.1
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.2e-41 172.9 101 86.1
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.0e-35 153.3 102 77.5
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.2e-35 152.1 102 76.5
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 8.5e-35 150.2 102 76.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 8.5e-35 150.2 102 76.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 8.5e-35 150.2 102 76.5
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.1e-34 149.8 103 77.7
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.5e-34 149.4 102 77.5
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.5e-34 149.4 102 77.5
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 4.2e-34 147.9 103 75.7
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.6e-33 146.0 102 75.5
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 2.1e-33 145.6 103 75.7
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.7e-33 145.2 102 74.5
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.6e-33 144.8 103 75.7
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 6.1e-33 144.1 102 73.5
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 8.0e-33 143.7 102 76.5
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.0e-32 143.3 102 74.5
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.8e-32 142.5 101 76.2
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.8e-32 142.5 102 75.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.3e-32 142.1 102 76.5
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 3.0e-32 141.7 99 74.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 3.0e-32 141.7 102 74.5
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 6.8e-32 140.6 99 73.7
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 6.8e-32 140.6 102 72.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 8.8e-32 140.2 101 73.3
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 8.8e-32 140.2 102 75.5
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 2.6e-31 138.7 103 74.8
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 3.4e-31 138.3 102 71.6
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.4e-31 138.3 99 72.7
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 4.4e-31 137.9 101 71.3
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 4.4e-31 137.9 101 68.3
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 4.4e-31 137.9 102 68.6
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 7.5e-31 137.1 102 72.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 7.5e-31 137.1 102 73.5
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 1.3e-30 136.3 102 71.6
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 2.2e-30 135.6 102 72.5
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.2e-30 135.6 102 70.6
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 2.2e-30 135.6 103 72.8
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 2.2e-30 135.6 102 69.6
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 2.8e-30 135.2 102 73.5
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 6.3e-30 134.0 103 69.9
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 7.0e-29 130.6 97 70.1
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 9.1e-29 130.2 102 68.6
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.2e-28 129.8 104 66.3
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 1.2e-28 129.8 100 69.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 2.7e-28 128.6 93 77.4
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 3.5e-28 128.3 100 67.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 3.5e-28 128.3 104 65.4
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 3.5e-28 128.3 102 70.6
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 4.5e-28 127.9 100 69.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 5.9e-28 127.5 102 72.5
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 7.7e-28 127.1 104 65.4
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 7.7e-28 127.1 103 67.0
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.0e-27 126.7 104 70.2
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 64.1
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 64.1
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 64.1
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 3.8e-27 124.8 95 71.6
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 6.5e-27 124.0 100 66.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 6.5e-27 124.0 92 72.8
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 8.6e-27 123.6 103 64.1
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 8.6e-27 123.6 105 64.8
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 5.5e-26 120.9 95 66.3
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 7.2e-26 120.6 100 64.0
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 9.5e-26 120.2 104 63.5
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 9.5e-26 120.2 104 63.5
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.2e-25 119.8 104 63.5
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.2e-25 119.8 104 63.5
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.2e-25 119.8 101 66.3
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.6e-25 119.4 102 65.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.8e-25 118.6 103 65.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 4.7e-25 117.9 97 64.9
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 8.0e-25 117.1 95 65.3
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.0e-24 116.7 96 67.7
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 2.3e-24 115.5 101 63.4
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 3.0e-24 115.2 101 66.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.0e-23 112.5 100 59.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 5.7e-23 110.9 95 63.2
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 9.8e-23 110.2 103 60.2
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 9.8e-23 110.2 103 60.2
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.2e-22 109.0 100 61.0
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 2.2e-22 109.0 98 65.3
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 3.7e-22 108.2 103 59.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 2.4e-21 105.5 100 58.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 3.1e-21 105.1 102 54.9
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 7.0e-21 104.0 103 57.3
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.6e-20 102.8 84 64.3
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.1e-18 96.7 105 56.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.9e-18 95.9 100 55.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.5e-15 86.3 80 60.0
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 2.6e-15 85.5 88 59.1
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.4e-15 84.7 91 58.2
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 7.0e-13 77.4 76 59.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 9.2e-13 77.0 66 65.2
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.6e-12 76.3 105 48.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.0e-11 73.6 95 49.5
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 9.8e-07 57.0 63 54.0
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 8.3e-06 53.9 105 34.3


User provided reference genes

Program Settings