Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 5.1e-59 231.1 138 100.0
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 2.6e-55 218.8 138 92.8
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 8.6e-30 134.0 137 62.0
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 2.3e-22 109.4 137 47.4
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 4.0e-19 98.6 137 44.5
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 9.8e-18 94.0 138 42.8
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 8.3e-17 90.9 137 49.6
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 1.1e-16 90.5 137 39.4
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 9.2e-16 87.4 147 39.5
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 1.6e-15 86.7 144 51.4
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 2.7e-15 85.9 140 54.3
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 2.7e-15 85.9 139 38.8
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 3.5e-15 85.5 132 40.9
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 6.0e-15 84.7 140 54.3
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.0e-14 84.0 142 52.1
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 2.3e-14 82.8 145 41.4
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 3.9e-14 82.0 143 41.3
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 4.3e-13 78.6 151 39.7
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 5.6e-13 78.2 138 39.1
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 5.6e-13 78.2 138 38.4
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 9.5e-13 77.4 146 33.6
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 1.2e-12 77.0 136 37.5
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 1.6e-12 76.6 137 41.6
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 2.1e-12 76.3 136 37.5
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 1.8e-11 73.2 136 38.2
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 1.8e-11 73.2 152 43.4
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 4.0e-11 72.0 137 35.0
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 6.8e-11 71.2 141 44.0
Phvul.007G111700 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 8.9e-11 70.9 136 39.7
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 2.0e-10 69.7 146 41.1
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 4.4e-10 68.6 143 34.3
Eucgr.K03333 Eucalyptus grandis HOM05D008269 ORTHO05D010153 5.8e-10 68.2 134 39.6
SalBow4G0749 Salvia bowleyana HOM05D008269 ORTHO05D010153 2.9e-09 65.9 130 50.8
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 3.7e-09 65.5 141 40.4
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 3.7e-09 65.5 138 34.8
MELO3C005418.2 Cucumis melo HOM05D032672 ORTHO05D010153 4.9e-09 65.1 144 43.1
Eucgr.K03336 Eucalyptus grandis HOM05D008269 ORTHO05D010153 6.4e-09 64.7 126 37.3
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 6.4e-09 64.7 140 35.0
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 6.4e-09 64.7 154 44.8
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.1e-08 63.9 131 32.8
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 1.4e-08 63.5 132 42.4
Glyma.16G204500 Glycine max HOM05D008269 ORTHO05D010153 3.2e-08 62.4 141 42.6
Lalb_Chr03g0033111 Lupinus albus HOM05D008269 ORTHO05D010153 3.2e-08 62.4 144 38.9
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 4.1e-08 62.0 143 42.0
ClCG01G005110 Citrullus lanatus HOM05D032672 ORTHO05D010153 5.4e-08 61.6 134 46.3
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 7.1e-08 61.2 137 44.5
Sed0014961 Sechium edule HOM05D032672 ORTHO05D010153 7.1e-08 61.2 143 40.6
Eucgr.K03335 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.6e-07 60.1 186 28.0
Lsat_1_v5_gn_8_8201 Lactuca sativa HOM05D055346 ORTHO05D010153 3.5e-07 58.9 140 34.3
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 4.6e-07 58.5 166 33.7
VMungo0720G1499 Vigna mungo HOM05D008269 ORTHO05D010153 7.8e-07 57.8 135 34.8
Oeu042584.1 Olea europaea HOM05D000236 ORTHO05D000192 1.7e-06 56.6 138 43.5
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 1.7e-06 56.6 161 34.2
Lalb_Chr01g0008831 Lupinus albus HOM05D008269 ORTHO05D010153 3.9e-06 55.5 152 32.9
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 3.9e-06 55.5 137 31.4
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 5.1e-06 55.1 141 34.0
FAN03G2753 Fragaria x ananassa HOM05D008269 ORTHO05D010153 5.1e-06 55.1 126 31.0
Glyma.09G153700 Glycine max HOM05D008269 ORTHO05D010153 5.1e-06 55.1 151 47.0
C03p03500 Brassica napus HOM05D023982 ORTHO05D010153 6.6e-06 54.7 152 40.1
BolC3t12892H Brassica oleracea HOM05D023982 ORTHO05D010153 6.6e-06 54.7 152 40.1


User provided reference genes

Program Settings