Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 3.9e-58 228.0 122 100.0
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.3e-53 213.0 121 90.9
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 1.9e-52 209.1 120 90.0
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 7.0e-52 207.2 120 90.0
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.2e-51 206.5 120 89.2
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.6e-51 206.1 122 88.5
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 6.0e-51 204.1 120 87.5
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.0e-50 203.4 120 86.7
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 1.7e-50 202.6 120 85.8
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.7e-50 202.6 120 85.8
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 3.0e-50 201.8 120 85.8
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 5.0e-50 201.1 120 87.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.0e-50 201.1 120 85.0
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 6.6e-50 200.7 120 86.7
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 8.6e-50 200.3 120 86.7
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.1e-49 199.9 120 85.0
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.1e-49 199.9 120 85.0
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.1e-49 199.9 122 84.4
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.5e-49 199.5 120 85.0
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 1.9e-49 199.1 120 85.0
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.9e-49 199.1 120 85.0
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.5e-49 198.7 120 86.7
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 2.5e-49 198.7 122 82.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 2.5e-49 198.7 120 85.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 2.5e-49 198.7 120 86.7
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.3e-49 198.4 120 82.5
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.3e-49 198.4 122 84.4
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 4.3e-49 198.0 121 84.3
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 4.3e-49 198.0 120 83.3
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 4.3e-49 198.0 120 84.2
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 5.6e-49 197.6 120 85.8
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 7.3e-49 197.2 119 84.9
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 7.3e-49 197.2 120 86.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 9.5e-49 196.8 120 83.3
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.2e-48 196.4 120 85.0
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.6e-48 196.1 120 83.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.6e-48 196.1 120 81.7
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.1e-48 195.7 120 84.2
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 2.1e-48 195.7 120 81.7
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 2.1e-48 195.7 120 84.2
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 2.8e-48 195.3 122 83.6
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 4.7e-48 194.5 120 84.2
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 6.2e-48 194.1 120 80.0
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 8.0e-48 193.7 120 83.3
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 1.4e-47 193.0 120 81.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.4e-47 193.0 120 83.3
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 82.5
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 82.5
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 80.0
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 81.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 5.2e-47 191.0 120 82.5
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 6.8e-47 190.7 120 80.0
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 8.9e-47 190.3 120 82.5
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 8.9e-47 190.3 120 82.5
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 1.2e-46 189.9 120 81.7
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.2e-46 189.9 120 80.8
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 80.0
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 80.0
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 81.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 2.6e-46 188.7 120 81.7
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 3.4e-46 188.3 120 83.3
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 80.8
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 80.8
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 4.4e-46 188.0 122 82.0
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 7.5e-46 187.2 120 78.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.3e-45 186.4 120 80.0
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 2.2e-45 185.7 120 79.2
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.9e-45 185.3 120 79.2
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 2.9e-45 185.3 120 79.2
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 4.9e-45 184.5 122 78.7
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 6.4e-45 184.1 120 78.3
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 6.4e-45 184.1 120 79.2
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 8.3e-45 183.7 120 80.8
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 1.1e-44 183.3 122 80.3
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.4e-44 183.0 170 62.4
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.4e-44 182.2 120 78.3
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 3.2e-44 181.8 120 79.2
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 4.1e-44 181.4 122 79.5
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 4.1e-44 181.4 122 79.5
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 7.1e-44 180.6 121 78.5
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 7.1e-44 180.6 120 76.7
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 77.5
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 77.5
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 2.1e-43 179.1 120 76.7
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.1e-43 179.1 120 79.2
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 2.7e-43 178.7 120 75.8
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 3.5e-43 178.3 120 76.7
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 3.5e-43 178.3 121 78.5
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 3.5e-43 178.3 109 84.4
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 4.6e-43 177.9 120 75.8
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.7e-42 176.0 120 75.8
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 6.6e-42 174.1 133 72.2
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 4.3e-41 171.4 120 72.5
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 4.3e-41 171.4 116 75.9
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 4.3e-41 171.4 116 75.9
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 5.6e-41 171.0 117 74.4
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 5.6e-41 171.0 113 77.9
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 9.5e-41 170.2 119 76.5
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 9.5e-41 170.2 119 76.5
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 1.2e-40 169.9 115 75.7
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.6e-40 169.5 120 72.5
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 2.1e-40 169.1 146 66.4
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 2.8e-40 168.7 119 73.9
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 2.3e-39 165.6 116 73.3
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 5.2e-39 164.5 131 65.6
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 5.2e-39 164.5 120 71.7
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.7e-37 159.5 120 70.0
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 5.4e-36 154.5 91 87.9
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-35 153.3 91 84.6
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.5e-33 146.4 94 81.9
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.5e-33 145.6 104 72.1
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 3.3e-33 145.2 115 62.6
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 5.6e-33 144.4 119 59.7
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 7.3e-33 144.1 99 76.8
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 1.7e-29 132.9 101 67.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 2.2e-29 132.5 91 74.7
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.7e-27 125.6 126 61.1
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.3e-26 123.2 119 61.3
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 5.6e-25 117.9 70 81.4
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 9.0e-23 110.5 69 81.2
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.6e-16 88.6 58 82.8
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.8e-14 81.3 46 80.4
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.7e-13 79.7 52 82.7
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.7e-11 72.4 52 69.2
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 1.8e-10 69.7 52 75.0
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.3e-08 63.5 37 75.7
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 4.5e-06 55.1 40 75.0


User provided reference genes

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