Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018076 Carpinus fangiana HOM05D000086 ORTHO05D000431 8.1e-80 300.4 162 100.0
Haze_24831 Corylus avellana HOM05D000086 ORTHO05D000431 1.0e-66 256.9 146 95.2
Haze_24826 Corylus avellana HOM05D000086 ORTHO05D000431 1.3e-66 256.5 146 94.5
Cfa002589 Carpinus fangiana HOM05D000086 ORTHO05D000431 4.8e-64 248.1 146 93.2
QL06p047938 Quercus lobata HOM05D000086 ORTHO05D000431 2.8e-32 142.5 138 64.5
CiPaw.03G146500 Carya illinoinensis HOM05D000086 ORTHO05D000431 1.2e-30 137.1 153 57.5
Prupe.6G194300 Prunus persica HOM05D000086 ORTHO05D000431 2.3e-26 122.9 137 54.0
MD01G1036900 Malus domestica HOM05D000086 ORTHO05D000431 9.7e-25 117.5 138 55.1
CiPaw.04G104200 Carya illinoinensis HOM05D000086 ORTHO05D000431 1.3e-24 117.1 116 60.3
CANSAT01G0420 Cannabis sativa HOM05D000086 ORTHO05D000431 1.4e-23 113.6 127 55.9
RcHm_v2.0_Chr2g0112241 Rosa chinensis HOM05D000086 ORTHO05D000431 3.5e-22 109.0 136 52.2
FAN19G0666 Fragaria x ananassa HOM05D000086 ORTHO05D000431 2.5e-20 102.8 136 49.3
FAN26G2743 Fragaria x ananassa HOM05D000086 ORTHO05D000431 3.2e-20 102.4 136 48.5
FAN28G1256 Fragaria x ananassa HOM05D000086 ORTHO05D000431 3.2e-20 102.4 136 48.5
FvH4_1g20164 Fragaria vesca HOM05D000086 ORTHO05D000431 5.5e-20 101.7 136 48.5
TAR628G0774 Trochodendron aralioides HOM05D000086 ORTHO05D000431 7.2e-20 101.3 124 54.8
TAR625G0609 Trochodendron aralioides HOM05D000086 ORTHO05D000431 2.1e-19 99.8 124 51.6
Actinidia01863 Actinidia chinensis HOM05D000086 ORTHO05D000431 8.8e-18 94.4 139 46.0
TAR381G1377 Trochodendron aralioides HOM05D000086 ORTHO05D000431 8.8e-18 94.4 125 51.2
Ciclev10025698m.g Citrus clementina HOM05D000086 ORTHO05D000431 6.3e-16 88.2 141 48.2
Lj4P279T8 Lonicera japonica HOM05D000086 ORTHO05D000431 1.1e-15 87.4 161 43.5
Manes.12G129600 Manihot esculenta HOM05D000086 ORTHO05D000431 1.4e-15 87.0 133 42.9
Gorai.008G091200 Gossypium raimondii HOM05D000086 ORTHO05D000431 4.1e-15 85.5 125 46.4
Potri.005G071300 Populus trichocarpa HOM05D000086 ORTHO05D000431 9.1e-15 84.3 119 50.4
CSS0014171 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 1.6e-14 83.6 163 44.2
Thecc.01G094900 Theobroma cacao HOM05D000086 ORTHO05D000431 3.5e-14 82.4 124 47.6
Nn1g05473 Nelumbo nucifera HOM05D000086 ORTHO05D000431 4.5e-14 82.0 121 48.8
Gohir.A12G084000 Gossypium hirsutum HOM05D000086 ORTHO05D000431 1.3e-13 80.5 125 44.8
Potri.007G097500 Populus trichocarpa HOM05D000086 ORTHO05D000431 2.2e-13 79.7 117 48.7
Cc07_g14510 Coffea canephora HOM05D000086 ORTHO05D000431 2.9e-13 79.3 133 45.9
Gohir.D12G081900 Gossypium hirsutum HOM05D000086 ORTHO05D000431 2.9e-13 79.3 125 44.8
Dinv09001 Davidia involucrata HOM05D000113 ORTHO05D005496 3.8e-13 79.0 123 41.5
Duzib187G0211 Durio zibethinus HOM05D000086 ORTHO05D000431 3.8e-13 79.0 127 44.9
Rhsim10G0169000 Rhododendron simsii HOM05D000086 ORTHO05D000431 3.8e-13 79.0 140 45.0
Hma1.2p1_0784F.1_g217310 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 6.5e-13 78.2 119 44.5
MELO3C007735.2 Cucumis melo HOM05D000086 ORTHO05D000431 1.5e-12 77.0 120 41.7
Nn5g29979 Nelumbo nucifera HOM05D000086 ORTHO05D000431 1.9e-12 76.6 118 44.1
TAR376G0764 Trochodendron aralioides HOM05D000086 ORTHO05D000431 1.2e-11 73.9 121 47.9
Manes.13G097400 Manihot esculenta HOM05D000086 ORTHO05D000431 2.1e-11 73.2 149 44.3
Sabra07G0080800 Salix brachista HOM05D000086 ORTHO05D000431 2.7e-11 72.8 117 47.0
CsaV3_6G045220 Cucumis sativus L. HOM05D000086 ORTHO05D000431 4.7e-11 72.0 144 41.0
Cpa.g.sc55.65 Carica papaya HOM05D000086 ORTHO05D000431 6.1e-11 71.6 124 47.6
ClCG01G018570 Citrullus lanatus HOM05D000086 ORTHO05D000431 6.1e-11 71.6 127 42.5
Sabra05G0058300 Salix brachista HOM05D000086 ORTHO05D000431 6.1e-11 71.6 101 51.5
Manes.07G037700 Manihot esculenta HOM05D000086 ORTHO05D000431 1.8e-10 70.1 135 39.3
MBI06_g03313_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D000431 2.3e-10 69.7 129 37.2
Lj4g0012708 Lotus japonicus HOM05D000086 ORTHO05D000431 5.2e-10 68.6 152 36.8
Ah.03g141920 Amaranthus hybridus HOM05D000086 ORTHO05D000431 8.8e-10 67.8 121 40.5
TWI74G1689 Tripterygium wilfordii HOM05D000086 ORTHO05D000431 8.8e-10 67.8 125 48.0
COL.COLO4_00217 Corchorus olitorius HOM05D000086 ORTHO05D000431 1.2e-09 67.4 156 39.1
Thecc.08G100700 Theobroma cacao HOM05D000086 ORTHO05D000431 1.5e-09 67.0 118 38.1
Hma1.2p1_0522F.1_g171890 Hydrangea macrophylla HOM05D000086 ORTHO05D000431 2.0e-09 66.6 143 35.7
PSO675G5884 Papaver somniferum HOM05D000086 ORTHO05D000431 2.0e-09 66.6 129 40.3
PGR102G2551 Punica granatum HOM05D000086 ORTHO05D000431 2.0e-09 66.6 108 43.5
Oeu000876.1 Olea europaea HOM05D000086 ORTHO05D000431 2.6e-09 66.2 119 41.2
Potri.007G111900 Populus trichocarpa HOM05D000086 ORTHO05D000431 2.6e-09 66.2 108 42.6
Actinidia24011 Actinidia chinensis HOM05D000086 ORTHO05D000431 3.4e-09 65.9 95 47.4
Duzib093G1162 Durio zibethinus HOM05D000086 ORTHO05D000431 5.7e-09 65.1 120 38.3
CSS0016182 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 2.8e-08 62.8 116 41.4
CSS0030238 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D043314 2.8e-08 62.8 116 41.4
PGSC0003DMG400016217 Solanum tuberosum HOM05D000086 ORTHO05D000431 2.8e-08 62.8 112 43.8
Actinidia26571 Actinidia chinensis HOM05D000086 ORTHO05D000431 3.7e-08 62.4 117 42.7
Duzib041G0657 Durio zibethinus HOM05D000086 ORTHO05D000431 3.7e-08 62.4 138 34.8
Oeu055124.1 Olea europaea HOM05D000086 ORTHO05D000431 3.7e-08 62.4 123 35.8
MSTRG.15706 Avicennia marina HOM05D000086 ORTHO05D000431 6.3e-08 61.6 118 41.5
AUR62027198 Chenopodium quinoa HOM05D000086 ORTHO05D000431 6.3e-08 61.6 136 38.2
Duzib248G0914 Durio zibethinus HOM05D000086 ORTHO05D000431 6.3e-08 61.6 93 43.0
VMungo0251G2524 Vigna mungo HOM05D000086 ORTHO05D000431 6.3e-08 61.6 108 42.6
Nitab4.5_0000241g0150 Nicotiana tabacum HOM05D000086 ORTHO05D000431 8.3e-08 61.2 120 40.8
Thecc.02G133000 Theobroma cacao HOM05D000086 ORTHO05D000431 8.3e-08 61.2 130 39.2
MSTRG.3753 Avicennia marina HOM05D000086 ORTHO05D000431 1.1e-07 60.8 131 37.4
Potri.017G049300 Populus trichocarpa HOM05D000086 ORTHO05D000431 1.1e-07 60.8 114 36.8
Sc16g0000330 Simmondsia chinensis HOM05D000086 ORTHO05D000431 1.4e-07 60.5 105 44.8
Oeu022082.1 Olea europaea HOM05D000086 ORTHO05D000431 3.1e-07 59.3 101 37.6
Peaxi162Scf00237g00125 Petunia axillaris HOM05D000086 ORTHO05D000431 3.1e-07 59.3 124 41.1
QL11p023242 Quercus lobata HOM05D000086 ORTHO05D000431 4.1e-07 58.9 138 34.8
CSS0014726 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 5.4e-07 58.5 93 45.2
Aqoxy6G00699 Aquilegia oxysepala HOM05D000086 ORTHO05D000431 7.0e-07 58.2 122 40.2
Manes.02G148600 Manihot esculenta HOM05D000086 ORTHO05D000431 7.0e-07 58.2 130 38.5
CiPaw.06G156200 Carya illinoinensis HOM05D000086 ORTHO05D000431 1.2e-06 57.4 113 36.3
COL.COLO4_32324 Corchorus olitorius HOM05D000086 ORTHO05D000431 2.0e-06 56.6 104 38.5
Sabra17G0036500 Salix brachista HOM05D000086 ORTHO05D000431 2.0e-06 56.6 113 37.2
Sopen11g005110 Solanum pennellii HOM05D000086 ORTHO05D000431 2.0e-06 56.6 136 39.0
Ciclev10001098m.g Citrus clementina HOM05D000086 ORTHO05D000431 3.5e-06 55.8 161 34.8
Duzib147G0707 Durio zibethinus HOM05D000086 ORTHO05D000431 3.5e-06 55.8 110 43.6
FAN26G0919 Fragaria x ananassa HOM05D000086 ORTHO05D000431 4.5e-06 55.5 62 50.0
Potri.002G101800 Populus trichocarpa HOM05D000086 ORTHO05D000431 4.5e-06 55.5 122 36.9
Lj5P233T15 Lonicera japonica HOM05D000086 ORTHO05D000431 7.7e-06 54.7 120 40.0


User provided reference genes

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