Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018055 Carpinus fangiana HOM05D000228 ORTHO05D002228 1.9e-65 252.3 120 100.0
Haze_18073 Corylus avellana HOM05D000228 ORTHO05D002228 4.2e-49 198.0 103 93.2
QL01p015188 Quercus lobata HOM05D004258 ORTHO05D002228 4.7e-32 141.4 104 67.3
QL02p003915 Quercus lobata HOM05D000228 ORTHO05D002228 4.7e-32 141.4 104 67.3
Actinidia22658 Actinidia chinensis HOM05D000228 ORTHO05D002228 3.0e-31 138.7 107 62.6
CiPaw.16G037700 Carya illinoinensis HOM05D000228 ORTHO05D002228 9.7e-30 133.7 105 62.9
GSVIVG01009433001 Vitis vinifera HOM05D000228 ORTHO05D002228 1.7e-29 132.9 103 58.3
CiPaw.15G052000 Carya illinoinensis HOM05D000228 ORTHO05D002228 1.4e-28 129.8 108 63.0
Manes.05G177300 Manihot esculenta HOM05D000228 ORTHO05D002228 1.8e-28 129.4 103 60.2
Dinv35925 Davidia involucrata HOM05D000228 ORTHO05D002228 1.3e-26 123.2 103 60.2
Hma1.2p1_0360F.1_g135920 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.7e-26 122.9 112 58.0
Hma1.2p1_0360F.1_g135925 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 2.2e-26 122.5 102 59.8
Hma1.2p1_1473F.1_g285730 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 2.2e-26 122.5 102 59.8
Lj4A765G44 Lonicera japonica HOM05D000228 ORTHO05D002228 5.5e-25 117.9 104 60.6
Thecc.08G001100 Theobroma cacao HOM05D000228 ORTHO05D002228 1.2e-24 116.7 104 55.8
CSS0007103 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D002228 6.1e-24 114.4 104 56.7
Gorai.005G101200 Gossypium raimondii HOM05D000228 ORTHO05D002228 8.8e-23 110.5 105 53.3
PGR031G1232 Punica granatum HOM05D000228 ORTHO05D002228 1.2e-22 110.2 111 53.2
Gohir.A02G082400 Gossypium hirsutum HOM05D000228 ORTHO05D002228 5.7e-22 107.8 105 52.4
Duzib093G1053 Durio zibethinus HOM05D000228 ORTHO05D002228 7.5e-22 107.5 104 52.9
TAR376G0065 Trochodendron aralioides HOM05D000228 ORTHO05D002228 2.8e-21 105.5 104 50.0
MD08G1093500 Malus domestica HOM05D000228 ORTHO05D002228 8.3e-21 104.0 103 50.5
Duzib041G0060 Durio zibethinus HOM05D000228 ORTHO05D002228 1.4e-20 103.2 93 52.7
Nn5g30398 Nelumbo nucifera HOM05D000228 ORTHO05D002228 1.4e-20 103.2 105 51.4
Rhsim06G0055000 Rhododendron simsii HOM05D000228 ORTHO05D002228 1.4e-20 103.2 106 50.9
PSO210G7831 Papaver somniferum HOM05D000228 ORTHO05D002228 1.8e-20 102.8 109 52.3
Migut.C00531 Erythranthe guttata HOM05D000228 ORTHO05D002228 3.1e-20 102.1 107 50.5
MSTRG.25069 Avicennia marina HOM05D000228 ORTHO05D002228 4.1e-20 101.7 107 49.5
Potri.014G023400 Populus trichocarpa HOM05D000228 ORTHO05D002228 4.1e-20 101.7 105 51.4
ClCG05G020220 Citrullus lanatus HOM05D000228 ORTHO05D002228 7.0e-20 100.9 104 51.9
Oeu044857.1 Olea europaea HOM05D000228 ORTHO05D002228 7.0e-20 100.9 101 52.5
TWI56G1010 Tripterygium wilfordii HOM05D000228 ORTHO05D002228 2.0e-19 99.4 105 50.5
FvH4_2g33750 Fragaria vesca HOM05D000228 ORTHO05D002228 4.5e-19 98.2 109 52.3
FAN24G2767 Fragaria x ananassa HOM05D000228 ORTHO05D002228 5.9e-19 97.8 109 52.3
Manes.18G041500 Manihot esculenta HOM05D000228 ORTHO05D002228 7.7e-19 97.4 103 49.5
Gohir.A05G205800 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.0e-18 97.1 104 46.2
Cpa.g.sc21.153 Carica papaya HOM05D000003 ORTHO05D000004 2.2e-18 95.9 106 48.1
Ciclev10002565m.g Citrus clementina HOM05D000228 ORTHO05D002228 2.2e-18 95.9 106 50.0
MD15G1077200 Malus domestica HOM05D000228 ORTHO05D002228 3.8e-18 95.1 108 47.2
Gorai.009G215500 Gossypium raimondii HOM05D000228 ORTHO05D002228 5.0e-18 94.7 104 46.2
Cc10_g04880 Coffea canephora HOM05D000228 ORTHO05D002228 8.5e-18 94.0 109 47.7
Gohir.D05G209100 Gossypium hirsutum HOM05D000228 ORTHO05D002228 8.5e-18 94.0 104 46.2
Nitab4.5_0004339g0100 Nicotiana tabacum HOM05D000228 ORTHO05D002228 8.5e-18 94.0 104 46.2
PSO170G1549 Papaver somniferum HOM05D000228 ORTHO05D002228 8.5e-18 94.0 109 48.6
COL.COLO4_10115 Corchorus olitorius HOM05D000228 ORTHO05D002228 1.1e-17 93.6 103 45.6
MELO3C016785.2 Cucumis melo HOM05D000228 ORTHO05D002228 4.2e-17 91.7 101 47.5
Prupe.1G430600 Prunus persica HOM05D000228 ORTHO05D002228 4.2e-17 91.7 106 47.2
Sc02g0007540 Simmondsia chinensis HOM05D000228 ORTHO05D002228 1.2e-16 90.1 111 46.8
CAN.G1812.2 Capsicum annuum HOM05D000228 ORTHO05D002228 1.6e-16 89.7 105 43.8
Eucgr.F02303 Eucalyptus grandis HOM05D000228 ORTHO05D002228 2.1e-16 89.4 116 45.7
CsaV3_4G034700 Cucumis sativus L. HOM05D000228 ORTHO05D002228 3.6e-16 88.6 104 47.1
RcHm_v2.0_Chr6g0308801 Rosa chinensis HOM05D000228 ORTHO05D002228 4.7e-16 88.2 111 45.0
HanXRQChr09g0267101 Helianthus annuus HOM05D000228 ORTHO05D002228 1.8e-15 86.3 110 49.1
Atru.chr13.751 Acer truncatum HOM05D000228 ORTHO05D002228 3.0e-15 85.5 106 46.2
CANSAT25G3330 Cannabis sativa HOM05D000228 ORTHO05D002228 4.0e-15 85.1 108 44.4
Lalb_Chr23g0267281 Lupinus albus HOM05D000228 ORTHO05D002228 4.0e-15 85.1 104 45.2
FAN27G2591 Fragaria x ananassa HOM05D000228 ORTHO05D002228 6.8e-15 84.3 100 48.0
DCAR_012794 Daucus carota HOM05D000228 ORTHO05D002228 8.8e-15 84.0 104 44.2
AUR62043031 Chenopodium quinoa HOM05D000228 ORTHO05D002228 2.6e-14 82.4 107 42.1
AUR62041663 Chenopodium quinoa HOM05D000228 ORTHO05D002228 3.4e-14 82.0 106 43.4
FAN20G0088 Fragaria x ananassa HOM05D000228 ORTHO05D002228 4.4e-14 81.6 107 48.6
Oeu054784.1 Olea europaea HOM05D000228 ORTHO05D002228 4.4e-14 81.6 105 46.7
FAN15G0998 Fragaria x ananassa HOM05D000228 ORTHO05D002228 7.5e-14 80.9 105 46.7
SalBow7G0925 Salvia bowleyana HOM05D000228 ORTHO05D002228 7.5e-14 80.9 106 44.3
Lalb_Chr14g0368461 Lupinus albus HOM05D000228 ORTHO05D002228 9.8e-14 80.5 117 43.6
EL10As7g23785 Beta vulgaris HOM05D000228 ORTHO05D002228 1.3e-13 80.1 107 42.1
Hund05330 Selenicereus undatus HOM05D000228 ORTHO05D002228 1.3e-13 80.1 110 45.5
CARHR155180 Cardamine hirsuta HOM05D000228 ORTHO05D002228 1.7e-13 79.7 110 42.7
THA.LOC104820500 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 2.2e-13 79.3 111 45.0
PGSC0003DMG400008002 Solanum tuberosum HOM05D000228 ORTHO05D002228 2.8e-13 79.0 105 43.8
AL5G25520 Arabidopsis lyrata HOM05D000228 ORTHO05D002228 3.7e-13 78.6 110 42.7
Lj1g0000098 Lotus japonicus HOM05D000228 ORTHO05D002228 3.7e-13 78.6 106 44.3
Phvul.009G067500 Phaseolus vulgaris HOM05D000228 ORTHO05D002228 3.7e-13 78.6 110 41.8
Sabra14G0016000 Salix brachista HOM05D000228 ORTHO05D002228 8.3e-13 77.4 104 42.3
AUR62041662 Chenopodium quinoa HOM05D000228 ORTHO05D002228 1.1e-12 77.0 104 43.3
Gohir.D02G090400 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.1e-12 77.0 105 43.8
MD08G1093000 Malus domestica HOM05D000228 ORTHO05D002228 1.4e-12 76.6 100 42.0
HanXRQChr16g0508861 Helianthus annuus HOM05D000228 ORTHO05D002228 1.8e-12 76.3 108 47.2
Sed0009441 Sechium edule HOM05D000228 ORTHO05D002228 1.8e-12 76.3 104 43.3
Sp5g15050 Schrenkiella parvula HOM05D000228 ORTHO05D002228 3.1e-12 75.5 110 42.7
Thhalv10002669m.g Eutrema salsugineum HOM05D000228 ORTHO05D002228 5.4e-12 74.7 109 42.2
THA.LOC104814176 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 5.4e-12 74.7 113 42.5
Carub.0005s1290 Capsella rubella HOM05D000228 ORTHO05D002228 7.0e-12 74.3 113 41.6
Ca_15933_v3 Cicer arietinum L. HOM05D000228 ORTHO05D002228 7.0e-12 74.3 98 42.9
Solyc04g078480.3 Solanum lycopersicum HOM05D000228 ORTHO05D002228 9.1e-12 73.9 105 41.9
Sopen04g032080 Solanum pennellii HOM05D000228 ORTHO05D002228 1.2e-11 73.6 105 41.9
AT3G46630 Arabidopsis thaliana HOM05D000228 ORTHO05D002228 2.0e-11 72.8 114 41.2
Glyma.04G041900 Glycine max HOM05D000228 ORTHO05D002228 2.0e-11 72.8 107 44.9
Oeu048946.1 Olea europaea HOM05D000228 ORTHO05D002228 2.0e-11 72.8 106 43.4
TAR625G1311 Trochodendron aralioides HOM05D000228 ORTHO05D002228 2.0e-11 72.8 80 50.0
Lsat_1_v5_gn_4_128040 Lactuca sativa HOM05D000228 ORTHO05D002228 5.9e-11 71.2 116 43.1
VMungo1309G3016 Vigna mungo HOM05D000228 ORTHO05D002228 8.6e-10 67.4 120 39.2
unitig_46.g17916 Utricularia gibba HOM05D000228 ORTHO05D002228 1.1e-09 67.0 106 38.7
Aa31LG4G15640 Aethionema arabicum HOM05D000228 ORTHO05D002228 1.9e-09 66.2 109 37.6
Medtr3g102270 Medicago truncatula HOM05D000228 ORTHO05D002228 5.5e-09 64.7 109 42.2
SGA_v2.0_scaffold74G24695 Striga asiatica HOM05D000228 ORTHO05D002228 5.5e-09 64.7 111 36.0
BcaB02g10715 Brassica carinata HOM05D000228 ORTHO05D002228 7.2e-09 64.3 110 41.8
BcaC01g02256 Brassica carinata HOM05D000228 ORTHO05D002228 4.7e-08 61.6 109 37.6
CDE04G0164 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 6.1e-08 61.2 107 37.4
Aqoxy6G02893 Aquilegia oxysepala HOM05D000228 ORTHO05D002228 1.0e-07 60.5 38 71.1
CDE07G0926 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 1.8e-07 59.7 107 41.1
Sed0024824 Sechium edule HOM05D000228 ORTHO05D002228 2.3e-07 59.3 46 56.5
BNapus_Darmor_BZH_scaffold_82p00050 Brassica napus HOM05D000228 ORTHO05D002228 5.2e-07 58.2 107 37.4
BolC3t19014H Brassica oleracea HOM05D000228 ORTHO05D002228 5.2e-07 58.2 107 37.4
BraA06t25644Z Brassica rapa HOM05D000228 ORTHO05D002228 5.2e-07 58.2 105 39.0
Psat5g041840 Pisum sativum HOM05D000228 ORTHO05D002228 5.2e-07 58.2 108 38.0
ECA232G1882 Erigeron canadensis HOM05D000228 ORTHO05D002228 1.5e-06 56.6 122 38.5
HPP92_008275 Vanilla planifolia HOM05D000228 ORTHO05D002228 1.5e-06 56.6 111 36.9
ATR0724G061 Amborella trichopoda HOM05D000228 ORTHO05D002228 2.0e-06 56.2 40 67.5
arahy.Tifrunner.gnm1.ann1.2T5YK4 Arachis hypogaea HOM05D000228 ORTHO05D002228 2.0e-06 56.2 93 35.5
arahy.Tifrunner.gnm1.ann1.S7U8LP Arachis hypogaea HOM05D000228 ORTHO05D002228 2.0e-06 56.2 93 35.5
Lj1g0018084 Lotus japonicus HOM05D000228 ORTHO05D002228 2.6e-06 55.8 105 39.0
A06p27060 Brassica napus HOM05D000228 ORTHO05D002228 4.4e-06 55.1 103 38.8
MBI16_g20931_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D002228 4.4e-06 55.1 110 36.4
Potri.014G023200 Populus trichocarpa HOM05D000228 ORTHO05D002228 4.4e-06 55.1 94 36.2
Lalb_Chr14g0368471 Lupinus albus HOM05D000228 ORTHO05D002228 7.5e-06 54.3 107 40.2


User provided reference genes

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