Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018042 Carpinus fangiana HOM05D022916 ORTHO05D011351 2.4e-44 181.8 91 100.0
Haze_18083 Corylus avellana HOM05D022916 ORTHO05D011351 2.8e-37 158.3 91 91.2
CiPaw.15G050500 Carya illinoinensis HOM05D022916 ORTHO05D011351 3.2e-17 91.7 94 67.0
QL02p003446 Quercus lobata HOM05D022916 ORTHO05D011351 3.9e-15 84.7 92 56.5
Ciclev10002816m.g Citrus clementina HOM05D016877 ORTHO05D011351 4.1e-12 74.7 79 57.0
Thecc.08G095800 Theobroma cacao HOM05D016877 ORTHO05D011351 1.7e-10 69.3 73 56.2
Dinv07910 Davidia involucrata HOM05D018019 ORTHO05D011351 1.1e-09 66.6 88 52.3
COL.COLO4_03643 Corchorus olitorius HOM05D016877 ORTHO05D011351 4.7e-08 61.2 72 50.0
Dinv07908 Davidia involucrata HOM05D018019 ORTHO05D011351 1.0e-07 60.1 87 50.6
Gohir.A06G022150 Gossypium hirsutum HOM05D016877 ORTHO05D011351 1.4e-07 59.7 65 55.4
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 3.9e-07 58.2 79 44.3
Sabra06G0006300 Salix brachista HOM05D008343 ORTHO05D009841 8.8e-07 57.0 75 48.0
Manes.05G178102 Manihot esculenta HOM05D018019 ORTHO05D011351 1.1e-06 56.6 66 50.0
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.1e-06 56.6 79 46.8
Potri.014G022200 Populus trichocarpa HOM05D022916 ORTHO05D011351 1.5e-06 56.2 84 42.9
Gohir.D05G209700 Gossypium hirsutum HOM05D000038 ORTHO05D000612 2.6e-06 55.5 78 43.6
Rhsim06G0056900 Rhododendron simsii HOM05D018019 ORTHO05D011351 2.6e-06 55.5 78 44.9


User provided reference genes

Program Settings