Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018025 Carpinus fangiana HOM05D009483 ORTHO05D010434 1.9e-23 112.5 98 100.0
Haze_18105 Corylus avellana HOM05D009483 ORTHO05D010434 1.7e-16 89.4 97 68.0
CiPaw.15G047300 Carya illinoinensis HOM05D009483 ORTHO05D010434 1.5e-15 86.3 98 84.7
TPR.G33686 Trifolium pratense HOM05D014667 ORTHO05D010434 1.6e-09 66.2 98 73.5
Atru.chr13.800 Acer truncatum HOM05D009483 ORTHO05D010434 7.7e-09 63.9 97 70.1
MD08G1088300 Malus domestica HOM05D017249 ORTHO05D010434 7.7e-09 63.9 98 74.5
Nitab4.5_0004707g0020 Nicotiana tabacum HOM05D009483 ORTHO05D010434 1.0e-08 63.5 99 73.7
QL02p002831 Quercus lobata HOM05D009483 ORTHO05D010434 1.3e-08 63.2 69 73.9
Thecc.08G092300 Theobroma cacao HOM05D022789 ORTHO05D010434 2.9e-08 62.0 98 71.4
CSS0042505 Camellia sinensis var. sinensis HOM05D009483 ORTHO05D010434 3.8e-08 61.6 94 75.5
COL.COLO4_28544 Corchorus olitorius HOM05D009483 ORTHO05D010434 3.8e-08 61.6 98 71.4
Nitab4.5_0000934g0160 Nicotiana tabacum HOM05D009483 ORTHO05D010434 5.0e-08 61.2 99 72.7
Sed0012458 Sechium edule HOM05D009483 ORTHO05D010434 5.0e-08 61.2 96 74.0
Medtr3g102780 Medicago truncatula HOM05D000634 ORTHO05D010557 1.1e-07 60.1 92 72.8
Cpa.g.sc21.118 Carica papaya HOM05D009483 ORTHO05D010434 1.5e-07 59.7 81 79.0
PGSC0003DMG400021535 Solanum tuberosum HOM05D009483 ORTHO05D010434 1.5e-07 59.7 99 69.7
Sed0009245 Sechium edule HOM05D009483 ORTHO05D010434 2.5e-07 58.9 78 85.9
Sopen04g031780 Solanum pennellii HOM05D009483 ORTHO05D010434 2.5e-07 58.9 99 69.7
GSVIVG01009377001 Vitis vinifera HOM05D009483 ORTHO05D010434 2.5e-07 58.9 80 83.8
Prupe.1G426000 Prunus persica HOM05D017249 ORTHO05D010434 3.2e-07 58.5 94 71.3
THA.LOC104812585 Tarenaya hassleriana HOM05D014382 ORTHO05D010434 4.2e-07 58.2 91 76.9
CAN.G1054.20 Capsicum annuum HOM05D009483 ORTHO05D010434 5.5e-07 57.8 99 70.7
Hma1.2p1_0210F.1_g089650 Hydrangea macrophylla HOM05D009483 ORTHO05D010434 9.4e-07 57.0 96 70.8
Sp1g23920 Schrenkiella parvula HOM05D014382 ORTHO05D010434 1.2e-06 56.6 90 74.4
Duzib093G1705 Durio zibethinus HOM05D022789 ORTHO05D010434 2.1e-06 55.8 98 69.4
Aa31LG6G15440 Aethionema arabicum HOM05D014382 ORTHO05D010434 3.6e-06 55.1 90 74.4
Gohir.D06G020100 Gossypium hirsutum HOM05D022789 ORTHO05D010434 4.7e-06 54.7 98 69.4
Gorai.010G024600 Gossypium raimondii HOM05D022789 ORTHO05D010434 4.7e-06 54.7 98 69.4
Thhalv10009209m.g Eutrema salsugineum HOM05D014382 ORTHO05D010434 6.1e-06 54.3 90 73.3
TWI12G1118 Tripterygium wilfordii HOM05D000634 ORTHO05D010557 6.1e-06 54.3 81 79.0
CARHR027190 Cardamine hirsuta HOM05D014382 ORTHO05D010434 8.0e-06 53.9 90 72.2


User provided reference genes

Program Settings