Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017980 Carpinus fangiana HOM05D009910 ORTHO05D011288 2.0e-63 246.1 180 100.0
Haze_18151 Corylus avellana HOM05D001920 ORTHO05D005408 5.2e-35 151.8 146 74.7
CiPaw.16G026700 Carya illinoinensis HOM05D009910 ORTHO05D011288 3.9e-14 82.4 62 62.9
CiPaw.15G036500 Carya illinoinensis HOM05D009910 ORTHO05D011288 5.0e-14 82.0 146 43.8
Gohir.A05G040600 Gossypium hirsutum HOM05D009910 ORTHO05D011288 8.0e-12 74.7 63 55.6
Gorai.009G042900 Gossypium raimondii HOM05D009910 ORTHO05D011288 8.0e-12 74.7 63 55.6
Dinv12440 Davidia involucrata HOM05D009910 ORTHO05D011288 5.2e-11 72.0 55 63.6
Gohir.D05G042100 Gossypium hirsutum HOM05D009910 ORTHO05D011288 6.8e-11 71.6 63 54.0
Prupe.1G408700 Prunus persica HOM05D009910 ORTHO05D011288 1.2e-10 70.9 58 55.2
RcHm_v2.0_Chr6g0311291 Rosa chinensis HOM05D009910 ORTHO05D011288 2.6e-10 69.7 56 57.1
FAN20G0594 Fragaria x ananassa HOM05D001920 ORTHO05D005408 3.7e-09 65.9 48 60.4
QL02p000667 Quercus lobata HOM05D000163 ORTHO05D000219 4.9e-09 65.5 41 75.6
Thecc.09G057800 Theobroma cacao HOM05D009910 ORTHO05D011288 6.4e-09 65.1 62 56.5
Duzib168G1622 Durio zibethinus HOM05D009910 ORTHO05D011288 1.1e-08 64.3 55 56.4
TAR626G0854 Trochodendron aralioides HOM05D009910 ORTHO05D011288 1.2e-07 60.8 48 60.4
COL.COLO4_21095 Corchorus olitorius HOM05D009910 ORTHO05D011288 2.0e-07 60.1 49 55.1
Gorai.001G021900 Gossypium raimondii HOM05D009910 ORTHO05D011288 6.0e-07 58.5 69 42.0
Nn6g35541 Nelumbo nucifera HOM05D009910 ORTHO05D011288 7.8e-07 58.2 42 59.5
TAR636G3469 Trochodendron aralioides HOM05D009910 ORTHO05D029020 7.8e-07 58.2 143 39.2
Gohir.D07G021200 Gossypium hirsutum HOM05D009910 ORTHO05D011288 3.0e-06 56.2 60 45.0
TWI32G1154 Tripterygium wilfordii HOM05D009910 ORTHO05D011288 3.0e-06 56.2 71 43.7


User provided reference genes

Program Settings