Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 9.6e-136 486.9 255 100.0
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 1.1e-112 410.2 317 74.1
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 6.7e-97 357.8 255 77.6
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 7.5e-88 327.8 256 70.3
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 4.8e-87 325.1 258 70.2
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 1.1e-78 297.4 250 67.2
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 3.1e-78 295.8 256 64.5
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 2.0e-77 293.1 256 64.5
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 5.5e-75 285.0 260 60.0
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.0e-73 279.3 257 61.1
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 5.7e-72 275.0 260 58.8
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 1.7e-71 273.5 257 58.4
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 2.8e-71 272.7 253 62.5
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 4.9e-71 271.9 259 61.0
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 6.3e-71 271.6 252 61.5
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 2.0e-69 266.5 255 59.2
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 3.5e-69 265.8 257 58.8
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.7e-68 263.5 250 59.6
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.9e-67 260.0 250 58.8
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 4.3e-67 258.8 259 58.7
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 7.3e-67 258.1 281 56.2
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 3.6e-66 255.8 255 60.8
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.5e-64 250.4 257 55.6
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 9.8e-64 247.7 259 55.2
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 2.9e-63 246.1 264 56.4
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 3.7e-63 245.7 257 56.8
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 6.4e-63 245.0 213 63.8
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 1.4e-62 243.8 254 57.9
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 2.4e-62 243.0 260 56.9
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 2.4e-62 243.0 259 55.6
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.4e-62 241.9 262 55.0
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.4e-62 241.9 262 54.6
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-61 240.0 259 54.4
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 2.0e-61 240.0 255 56.1
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 2.0e-61 240.0 250 55.6
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.7e-61 239.6 249 59.8
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 2.7e-61 239.6 257 56.8
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 3.5e-61 239.2 250 54.4
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 6.0e-61 238.4 262 54.2
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 7.8e-61 238.0 255 55.7
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 7.8e-61 238.0 273 56.4
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.7e-60 236.9 249 59.4
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 3.9e-60 235.7 262 54.2
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 5.0e-60 235.3 262 53.8
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 6.6e-60 235.0 220 59.5
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 6.6e-60 235.0 268 53.0
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 2.8e-58 229.6 267 55.8
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 2.8e-58 229.6 253 56.1
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 6.2e-58 228.4 265 55.1
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 6.2e-58 228.4 246 55.7
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 8.1e-58 228.0 263 52.5
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 1.4e-57 227.3 254 51.6
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 1.8e-57 226.9 255 54.9
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 2.3e-57 226.5 248 53.2
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 3.1e-57 226.1 267 53.9
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 5.2e-57 225.3 251 54.2
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 5.2e-57 225.3 251 54.2
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 6.8e-57 224.9 257 56.8
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 8.9e-57 224.6 259 52.9
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 1.2e-56 224.2 272 52.9
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-56 223.4 267 54.3
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 2.6e-56 223.0 258 53.9
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 5.8e-56 221.9 258 52.3
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 7.5e-56 221.5 250 53.2
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 1.3e-55 220.7 260 53.5
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.3e-55 220.7 252 51.2
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 2.4e-54 216.5 253 51.0
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 3.2e-54 216.1 253 53.8
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.2e-53 214.2 254 50.8
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.6e-53 213.8 179 61.5
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 2.1e-53 213.4 198 63.1
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 2.7e-53 213.0 257 52.9
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 3.5e-53 212.6 252 51.6
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 6.0e-53 211.8 261 49.0
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 7.8e-53 211.5 254 52.4
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 2.3e-52 209.9 257 52.1
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 3.0e-52 209.5 253 51.8
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 6.6e-52 208.4 245 52.2
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 1.1e-51 207.6 251 51.4
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 2.5e-51 206.5 282 49.3
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 3.3e-51 206.1 260 49.6
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 4.3e-51 205.7 270 45.9
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 7.3e-51 204.9 248 50.0
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 2.1e-50 203.4 244 52.0
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 6.2e-50 201.8 257 50.2
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 1.1e-49 201.1 262 50.4
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 3.1e-49 199.5 266 48.1
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 3.1e-49 199.5 266 48.1
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 6.8e-49 198.4 235 51.9
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 8.9e-49 198.0 266 48.1
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 1.2e-48 197.6 243 51.4
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 1.5e-48 197.2 240 51.7
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 3.4e-48 196.1 253 49.0
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 3.4e-48 196.1 256 47.7
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 4.4e-48 195.7 265 48.3
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 9.9e-48 194.5 244 50.0
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 4.9e-47 192.2 259 45.9
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 6.4e-47 191.8 258 44.6
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 1.1e-46 191.0 163 58.3
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 2.4e-46 189.9 370 38.6
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 4.1e-46 189.1 255 45.9
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 5.4e-46 188.7 259 46.7
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 5.4e-46 188.7 254 47.6
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 2.7e-45 186.4 249 47.8
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.7e-45 186.4 296 45.3
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 6.0e-45 185.3 256 45.3
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 6.0e-45 185.3 262 48.5
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 1.0e-44 184.5 258 45.7
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 3.0e-44 183.0 256 45.7
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 6.6e-44 181.8 171 60.8
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 2.5e-43 179.9 256 46.5
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 4.3e-43 179.1 248 49.2
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 2.8e-42 176.4 173 52.0
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 6.2e-42 175.3 281 42.3
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 6.8e-41 171.8 270 45.2
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 8.9e-41 171.4 252 45.6
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 1.2e-40 171.0 278 41.7
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 9.9e-40 167.9 263 41.8
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.3e-39 167.5 244 48.0
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 3.2e-38 162.9 241 44.4
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 4.2e-38 162.5 137 62.0
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 5.4e-38 162.2 252 42.5
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 7.1e-38 161.8 153 56.2
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 5.6e-35 152.1 178 48.9
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 7.3e-35 151.8 243 46.1
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.6e-32 143.3 365 34.8
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 9.9e-32 141.4 142 55.6
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.1e-30 137.9 255 41.2
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 3.0e-28 129.8 149 53.0
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 1.6e-26 124.0 138 47.1
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 2.1e-26 123.6 187 40.1
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 2.0e-24 117.1 228 36.0
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.3e-23 114.4 122 59.0
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 8.4e-23 111.7 153 47.1
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 2.5e-19 100.1 73 64.4
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 3.7e-18 96.3 65 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.1e-17 94.7 210 33.3
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 1.8e-17 94.0 125 51.2
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 2.4e-17 93.6 136 38.2
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 9.0e-17 91.7 145 40.0
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 1.5e-16 90.9 133 49.6
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 7.6e-16 88.6 217 31.8
QL03p011519 Quercus lobata HOM05D004579 ORTHO05D005376 1.3e-15 87.8 87 62.1
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.7e-15 87.4 129 39.5
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 4.2e-14 82.8 109 41.3
vmacro00163 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 3.5e-13 79.7 230 33.9
Rhsim01G0128100 Rhododendron simsii HOM05D033462 ORTHO05D011520 4.8e-10 69.3 129 38.8
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 4.5e-08 62.8 54 53.7
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 4.5e-08 62.8 54 53.7
Actinidia18194 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.9e-07 60.1 66 50.0
Rhsim01G0127300 Rhododendron simsii HOM05D033462 ORTHO05D005376 8.4e-07 58.5 101 39.6
MCO09G383 Micromonas commoda HOM05D004579 ORTHO05D005376 4.2e-06 56.2 90 33.3


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