Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 8.3e-229 796.6 374 100.0
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 8.9e-215 750.0 412 87.6
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 4.5e-190 667.9 375 84.5
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 8.4e-181 637.1 368 79.6
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 2.4e-175 619.0 375 77.3
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 1.3e-173 613.2 375 76.0
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 2.1e-171 605.9 362 76.8
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.6e-171 605.1 368 75.8
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.0e-170 602.1 368 75.5
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 2.5e-169 599.0 374 73.5
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 2.0e-166 589.3 364 74.7
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 7.7e-166 587.4 380 73.9
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.7e-165 586.3 377 74.0
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 7.2e-164 580.9 370 74.6
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 1.2e-163 580.1 379 72.0
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 7.9e-163 577.4 377 72.7
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 1.4e-162 576.6 382 72.3
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 2.0e-161 572.8 373 71.6
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 2.6e-161 572.4 376 71.8
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 7.4e-161 570.9 304 86.2
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 9.7e-161 570.5 371 71.4
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 1.4e-159 566.6 422 65.6
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 2.2e-157 559.3 375 69.9
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 5.0e-157 558.1 374 70.9
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 4.2e-156 555.1 377 69.5
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 5.5e-156 554.7 369 69.6
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 1.6e-155 553.1 378 69.3
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 4.7e-155 551.6 384 68.2
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 1.1e-151 540.4 380 68.2
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 1.4e-151 540.0 365 70.7
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 1.8e-151 539.7 379 68.9
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 9.1e-151 537.3 352 72.4
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 4.5e-150 535.0 378 66.1
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 2.2e-149 532.7 378 68.3
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 1.5e-148 530.0 374 65.5
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 2.1e-147 526.2 429 60.8
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 3.6e-147 525.4 312 79.2
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 1.0e-146 523.9 324 74.1
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 6.7e-146 521.2 332 71.7
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 1.2e-145 520.4 334 70.7
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 2.0e-145 519.6 334 69.8
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 4.4e-145 518.5 334 69.8
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 1.3e-144 516.9 302 78.8
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 2.2e-144 516.2 334 69.5
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 3.1e-143 512.3 343 66.8
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 2.0e-142 509.6 347 68.3
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 2.7e-142 509.2 339 69.3
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 4.5e-142 508.4 351 67.0
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 7.7e-142 507.7 316 75.9
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 1.7e-141 506.5 329 72.0
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.9e-141 505.8 316 74.4
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 2.3e-138 496.1 369 63.4
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 7.5e-137 491.1 339 68.1
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 1.7e-136 490.0 367 64.6
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.2e-136 489.6 351 67.5
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 8.3e-136 487.6 363 62.3
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 2.8e-131 472.6 356 61.5
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 8.0e-131 471.1 386 61.1
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 1.8e-130 469.9 306 72.9
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 1.1e-127 460.7 274 74.8
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 1.2e-126 457.2 380 61.8
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 6.8e-122 441.4 350 59.4
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 5.8e-121 438.3 344 61.0
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 7.5e-121 438.0 340 60.9
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.1e-119 434.1 351 58.7
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 8.3e-112 407.9 312 65.4
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 1.6e-110 403.7 323 53.9
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 1.7e-109 400.2 330 55.5
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 2.2e-104 383.3 334 53.9
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 3.7e-104 382.5 239 71.1
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 5.1e-101 372.1 316 55.1
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 8.4e-72 275.0 142 85.9
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 1.9e-71 273.9 343 42.3
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 7.1e-71 271.9 183 71.6
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 2.2e-64 250.4 194 65.5
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 1.3e-61 241.1 384 35.9
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 1.4e-47 194.5 137 63.5
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 5.5e-47 192.6 127 66.1
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 1.8e-45 187.6 160 60.6
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.8e-42 177.6 137 62.0
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 3.0e-29 133.7 294 34.0
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 2.4e-26 124.0 81 67.9
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 1.5e-23 114.8 59 84.7
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 5.7e-20 102.8 85 56.5
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 2.0e-17 94.4 163 39.3
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 5.4e-10 69.7 44 72.7
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 9.2e-10 68.9 43 74.4
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 2.3e-08 64.3 34 82.4


User provided reference genes

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