Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 2.1e-141 505.8 264 100.0
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.1e-57 227.6 150 80.0
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.8e-53 213.0 148 76.4
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.4e-49 200.7 136 78.7
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.4e-49 200.7 136 78.7
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.4e-49 199.9 151 70.9
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.4e-49 199.9 151 70.9
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 3.2e-49 199.5 160 69.4
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.2e-48 197.6 136 78.7
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.6e-48 197.2 134 78.4
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.6e-48 197.2 136 77.9
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 7.8e-48 194.9 138 76.1
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.3e-47 194.1 149 71.1
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 8.6e-47 191.4 136 76.5
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.5e-46 190.7 136 75.7
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.5e-46 189.9 119 83.2
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 5.6e-46 188.7 135 74.1
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 9.6e-46 188.0 149 66.4
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.6e-45 187.2 147 68.7
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 1.6e-45 187.2 141 72.3
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.1e-45 186.8 150 68.7
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.8e-45 186.4 135 73.3
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 2.8e-45 186.4 136 74.3
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 8.1e-45 184.9 140 71.4
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.1e-44 184.5 135 73.3
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.1e-44 184.5 148 67.6
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.4e-44 184.1 135 71.9
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.4e-44 184.1 135 72.6
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.8e-44 183.7 149 68.5
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 3.1e-44 183.0 135 72.6
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.0e-44 182.6 138 72.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.0e-44 182.6 151 64.2
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 6.8e-44 181.8 135 68.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.5e-43 180.6 150 65.3
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 3.4e-43 179.5 132 71.2
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 4.4e-43 179.1 150 63.3
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 4.4e-43 179.1 136 71.3
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 5.8e-43 178.7 151 62.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 5.8e-43 178.7 148 68.2
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 7.6e-43 178.3 146 67.8
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 9.9e-43 177.9 135 68.9
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.3e-42 177.6 142 69.0
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 3.8e-42 176.0 140 68.6
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 6.4e-42 175.3 148 64.9
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 8.4e-42 174.9 134 68.7
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 8.4e-42 174.9 134 68.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 8.4e-42 174.9 151 64.2
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 4.2e-41 172.6 136 69.1
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 5.4e-41 172.2 227 47.1
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 7.1e-41 171.8 145 66.2
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.3e-41 171.4 145 66.2
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-40 171.0 144 66.0
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 2.1e-40 170.2 146 65.1
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 4.6e-40 169.1 135 68.1
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 7.8e-40 168.3 145 62.8
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.3e-39 167.5 150 62.7
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 3.0e-39 166.4 144 63.9
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 3.0e-39 166.4 133 66.2
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.9e-39 166.0 144 65.3
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 5.1e-39 165.6 168 57.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 5.1e-39 165.6 133 66.2
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 5.1e-39 165.6 133 66.2
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 6.6e-39 165.2 167 58.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.9e-38 163.7 136 66.9
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.3e-37 161.0 143 64.3
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.6e-37 160.6 153 59.5
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 2.8e-37 159.8 136 64.7
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.4e-36 157.5 136 65.4
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.8e-36 157.1 153 57.5
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.8e-36 157.1 135 65.2
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 3.1e-36 156.4 136 64.7
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 4.0e-36 156.0 153 55.6
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.5e-35 154.1 136 64.0
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.0e-35 153.7 149 59.7
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 7.6e-35 151.8 135 63.0
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 6.4e-34 148.7 136 61.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 8.4e-34 148.3 133 66.2
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.9e-33 147.1 87 82.8
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.4e-33 146.7 145 59.3
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 7.1e-33 145.2 144 61.1
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 7.1e-33 145.2 150 58.0
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 9.3e-33 144.8 153 54.2
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.1e-32 143.7 155 57.4
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.7e-31 140.6 149 56.4
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.7e-31 140.6 145 58.6
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 3.9e-31 139.4 153 53.6
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 3.9e-31 139.4 146 56.2
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 8.7e-31 138.3 136 58.1
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 8.7e-31 138.3 136 58.1
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 8.7e-31 138.3 136 58.1
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 8.7e-31 138.3 136 58.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.5e-30 137.5 137 56.2
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 2.1e-29 133.7 96 66.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 2.1e-29 133.7 139 59.0
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 4.8e-29 132.5 135 59.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 5.3e-28 129.0 153 50.3
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.7e-26 124.0 148 53.4
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 3.8e-26 122.9 174 47.1
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.9e-25 120.6 168 49.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 9.3e-25 118.2 134 53.7
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 4.6e-24 115.9 136 49.3
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.3e-23 114.4 126 54.0
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.3e-23 113.6 85 67.1
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 3.0e-23 113.2 86 66.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.7e-23 111.7 141 48.2
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 8.7e-23 111.7 98 65.3
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-22 110.5 141 48.2
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 3.3e-22 109.8 141 47.5
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.3e-22 109.8 141 48.9
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 3.3e-22 109.8 136 50.0
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.3e-22 109.4 141 48.2
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 9.6e-22 108.2 135 49.6
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-21 107.5 105 59.0
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 6.2e-21 105.5 140 48.6
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.2e-19 101.3 72 70.8
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 3.8e-18 96.3 124 51.6
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 5.5e-17 92.4 112 53.6
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 5.5e-17 92.4 96 50.0
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 4.6e-16 89.4 52 92.3
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 1.3e-15 87.8 105 55.2
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.9e-14 84.0 83 50.6
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 5.3e-12 75.9 125 44.8
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 1.7e-10 70.9 38 81.6
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 3.2e-09 66.6 74 54.1
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 1.6e-08 64.3 52 69.2
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 3.6e-08 63.2 128 36.7
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 1.8e-07 60.8 111 44.1


User provided reference genes

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