Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.8e-66 255.8 128 100.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 5.8e-57 224.2 128 85.9
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.9e-55 219.2 129 84.5
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 5.5e-55 217.6 128 82.0
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.0e-53 213.4 128 78.9
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.3e-53 213.0 128 78.1
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.8e-53 212.6 128 77.3
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.8e-53 212.6 128 78.1
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.8e-53 212.6 129 81.4
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.0e-53 211.8 128 78.1
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 5.1e-53 211.1 128 81.2
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.1e-52 209.9 129 77.5
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.1e-52 209.9 124 79.0
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.5e-52 209.5 124 79.0
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.5e-52 208.8 124 79.0
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 7.4e-52 207.2 130 76.9
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 2.1e-51 205.7 128 75.8
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.8e-51 205.3 128 78.1
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 3.7e-51 204.9 133 76.7
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.8e-51 204.5 128 75.0
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.2e-51 204.1 128 78.1
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 6.2e-51 204.1 128 78.1
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 8.2e-51 203.8 171 64.9
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 1.4e-50 203.0 128 78.1
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.1e-50 201.8 129 76.7
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 3.1e-50 201.8 128 78.9
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.1e-50 201.8 128 77.3
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 3.1e-50 201.8 130 75.4
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 4.1e-50 201.4 128 74.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.2e-49 199.9 129 76.7
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.2e-49 199.9 126 76.2
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.5e-49 199.5 129 74.4
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 2.0e-49 199.1 129 74.4
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 3.4e-49 198.4 126 70.6
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.5e-49 198.0 130 73.8
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 7.6e-49 197.2 129 76.0
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.7e-48 196.1 127 76.4
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 2.2e-48 195.7 128 76.6
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 2.9e-48 195.3 129 72.9
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 3.8e-48 194.9 128 71.9
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.8e-48 194.9 136 72.8
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 5.0e-48 194.5 129 72.9
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 5.0e-48 194.5 126 69.8
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 6.5e-48 194.1 145 66.9
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.4e-47 193.0 128 73.4
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.4e-47 193.0 120 75.0
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.4e-47 193.0 127 74.0
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.9e-47 192.6 121 75.2
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.5e-47 192.2 125 76.0
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.5e-47 192.2 117 76.9
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 4.2e-47 191.4 128 74.2
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 5.5e-47 191.0 126 75.4
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 5.5e-47 191.0 128 69.5
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 9.3e-47 190.3 129 72.1
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.2e-46 189.9 122 71.3
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.2e-46 189.9 121 73.6
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 1.2e-46 189.9 128 69.5
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 1.6e-46 189.5 131 71.8
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 1.6e-46 189.5 128 71.1
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 4.6e-46 188.0 129 75.2
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 7.9e-46 187.2 128 67.2
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 7.9e-46 187.2 128 68.0
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 7.9e-46 187.2 128 68.0
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 7.9e-46 187.2 128 68.0
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 1.3e-45 186.4 128 68.0
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 1.3e-45 186.4 137 71.5
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 1.3e-45 186.4 129 69.0
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.8e-45 186.0 128 68.0
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.8e-45 186.0 129 67.4
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.8e-45 186.0 128 67.2
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.3e-45 185.7 128 67.2
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.3e-45 185.7 128 67.2
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 3.0e-45 185.3 128 67.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.9e-45 184.9 128 66.4
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 3.9e-45 184.9 128 71.1
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 1.5e-44 183.0 105 81.0
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 3.3e-44 181.8 129 67.4
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 4.3e-44 181.4 128 71.1
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.3e-43 179.9 122 68.0
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.3e-43 179.9 128 69.5
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.2e-43 179.1 128 68.8
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 3.7e-43 178.3 122 68.0
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 4.8e-43 177.9 145 65.5
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 4.8e-43 177.9 122 72.1
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.8e-43 177.9 107 76.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 2.4e-42 175.6 111 74.8
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 4.5e-41 171.4 89 95.5
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.4e-39 166.4 118 62.7
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.0e-37 158.7 112 69.6
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 1.1e-36 156.8 109 70.6
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 3.3e-36 155.2 115 61.7
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 2.2e-35 152.5 128 67.2
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.1e-34 150.2 112 67.0
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 3.1e-34 148.7 99 70.7
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 3.1e-34 148.7 104 66.3
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 3.1e-34 148.7 122 56.6
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 3.4e-33 145.2 122 57.4
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 4.5e-33 144.8 102 61.8
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.6e-30 136.3 132 50.8
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 3.6e-30 135.2 90 71.1
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 3.0e-29 132.1 96 69.8
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.5e-28 129.8 105 55.2
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 3.3e-28 128.6 86 72.1
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 5.7e-28 127.9 101 66.3
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 1.7e-27 126.3 128 50.8
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.2e-27 125.9 127 48.8
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.2e-27 125.9 127 49.6
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.8e-26 122.9 132 49.2
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 2.4e-26 122.5 117 49.6
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 4.5e-25 118.2 79 67.1
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 3.6e-22 108.6 131 51.9
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 6.7e-21 104.4 65 69.2
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.0e-20 102.8 129 47.3
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.3e-16 90.1 62 67.7
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.2e-16 89.4 63 60.3
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.3e-13 79.3 58 67.2
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 2.6e-12 75.9 51 70.6
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.4e-10 70.1 43 74.4
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 7.7e-09 64.3 39 71.8
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 8.0e-06 54.3 46 58.7


User provided reference genes

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