Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 7.2e-167 590.5 297 100.0
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 1.6e-126 456.4 260 90.0
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 3.9e-112 408.7 240 86.2
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 5.1e-104 381.7 241 80.5
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.9e-99 365.9 244 77.0
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 3.2e-98 362.5 243 79.8
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 7.1e-98 361.3 241 76.3
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 2.7e-97 359.4 242 77.7
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.5e-97 359.0 276 72.1
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.3e-96 357.1 246 76.4
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 3.0e-96 355.9 241 75.5
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 6.6e-96 354.8 248 74.6
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 8.7e-96 354.4 241 75.1
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 2.5e-95 352.8 242 76.9
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 9.6e-95 350.9 245 75.9
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.3e-94 350.5 242 74.4
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.3e-94 350.5 242 74.4
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.8e-94 348.6 246 74.0
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 2.4e-93 346.3 242 74.0
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 6.9e-93 344.7 240 74.2
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 9.0e-93 344.4 242 75.2
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.2e-92 344.0 235 77.4
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.2e-92 344.0 244 73.8
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.2e-92 344.0 241 75.9
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 9.9e-92 340.9 245 75.1
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.3e-91 340.5 247 72.9
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.3e-91 340.5 247 72.9
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 1.7e-91 340.1 247 72.5
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.7e-91 340.1 243 74.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 8.4e-91 337.8 245 73.5
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.1e-90 337.4 246 73.2
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.4e-90 337.0 245 73.9
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 1.4e-90 337.0 249 71.5
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.9e-90 336.7 265 71.3
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.9e-90 336.7 265 71.3
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 4.2e-90 335.5 238 73.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.2e-90 335.5 266 71.4
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.2e-89 334.0 253 71.1
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.2e-89 334.0 253 71.1
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 1.6e-89 333.6 292 62.7
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 1.0e-88 330.9 243 74.9
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.3e-88 330.5 241 73.4
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.3e-88 329.7 241 75.5
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.3e-88 329.7 241 71.8
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 3.0e-88 329.3 242 69.8
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 5.1e-88 328.6 252 71.8
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 5.1e-88 328.6 245 70.6
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 5.6e-87 325.1 240 68.8
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 9.6e-87 324.3 244 73.8
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 2.8e-86 322.8 253 68.8
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.8e-86 322.0 241 68.9
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 8.1e-86 321.2 288 62.2
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.0e-85 318.9 246 70.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 5.3e-85 318.5 242 70.7
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 5.8e-84 315.1 246 69.1
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 7.6e-84 314.7 270 64.1
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 4.9e-83 312.0 240 70.0
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 5.5e-82 308.5 194 75.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 1.6e-81 307.0 245 67.8
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.6e-81 307.0 166 87.3
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.7e-81 306.2 242 69.0
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 7.9e-81 304.7 243 67.9
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 7.9e-81 304.7 243 67.9
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.8e-80 303.5 244 64.3
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.3e-80 303.1 244 64.3
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 3.0e-80 302.8 241 65.6
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.9e-80 302.4 237 67.5
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 3.9e-80 302.4 249 63.1
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 5.1e-80 302.0 246 63.8
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.5e-79 300.4 251 62.5
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 3.3e-79 299.3 247 65.2
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 3.3e-79 299.3 257 66.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 4.3e-79 298.9 267 59.9
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 5.6e-79 298.5 246 63.4
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 9.6e-79 297.7 240 66.7
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 1.6e-78 297.0 240 67.1
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 1.6e-78 297.0 240 67.1
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 3.7e-78 295.8 160 86.9
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.7e-78 295.8 240 66.2
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 4.8e-78 295.4 305 57.4
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 6.2e-78 295.0 240 66.2
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 3.1e-77 292.7 249 61.0
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 6.9e-77 291.6 271 60.1
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.2e-76 290.8 257 61.5
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.2e-76 290.8 234 65.0
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 2.6e-76 289.7 245 62.9
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 2.6e-76 289.7 243 63.8
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 3.4e-76 289.3 163 85.3
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.3e-75 287.3 245 60.4
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 2.2e-75 286.6 232 64.2
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.2e-75 286.6 245 60.4
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.4e-74 283.9 246 63.8
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.8e-70 269.6 247 61.1
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.8e-70 269.6 247 61.1
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 4.8e-70 268.9 254 59.1
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 5.3e-69 265.4 240 60.4
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 1.7e-67 260.4 163 80.4
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 5.5e-66 255.4 240 60.0
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.7e-62 243.8 169 69.8
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.0e-59 234.6 190 70.0
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 1.6e-57 227.3 190 58.9
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 3.9e-56 222.6 110 95.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 6.7e-56 221.9 209 55.0
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 3.3e-55 219.5 130 80.0
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 5.7e-55 218.8 201 57.7
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.2e-54 216.9 243 55.1
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 3.5e-52 209.5 131 74.8
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 5.9e-52 208.8 189 63.5
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 5.2e-48 195.7 193 59.6
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 4.4e-47 192.6 197 55.8
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.5e-42 176.8 154 64.9
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.8e-38 163.3 90 83.3
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.2e-33 147.9 107 67.3
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 3.1e-29 133.3 86 70.9
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.6e-25 120.9 154 42.9
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.1e-25 120.6 96 66.7
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.3e-22 111.3 56 94.6
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 1.7e-22 110.9 96 53.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.9e-18 97.4 49 87.8
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 9.5e-18 95.1 65 67.7
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 8.0e-17 92.0 56 78.6
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 2.3e-11 73.9 38 78.9
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 8.9e-08 62.0 31 87.1
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 1.5e-07 61.2 38 76.3
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 2.9e-06 57.0 34 73.5


User provided reference genes

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