Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 3.7e-73 278.1 140 100.0
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 8.6e-70 266.9 140 96.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.3e-51 205.7 151 72.8
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 5.2e-51 204.5 145 77.2
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 4.4e-50 201.4 147 73.5
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 8.4e-49 197.2 145 71.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.8e-47 190.7 144 71.5
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 3.3e-45 185.3 155 65.2
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 5.6e-45 184.5 153 68.6
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 6.2e-44 181.0 140 70.0
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 1.1e-43 180.3 142 70.4
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 4.0e-43 178.3 135 68.1
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 4.0e-43 178.3 141 68.8
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.2e-43 177.9 143 67.1
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 5.2e-43 177.9 142 64.8
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.6e-42 175.6 142 66.2
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 5.8e-42 174.5 144 65.3
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-41 172.9 144 64.6
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.9e-41 172.2 108 75.9
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 3.8e-41 171.8 150 62.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 4.9e-41 171.4 140 66.4
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 8.4e-41 170.6 144 62.5
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.4e-41 170.6 144 61.1
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.4e-40 169.9 137 67.2
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.4e-40 169.9 144 61.1
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 2.4e-40 169.1 143 63.6
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 4.2e-40 168.3 139 63.3
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.2e-39 166.8 112 75.0
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 3.5e-39 165.2 140 61.4
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 4.6e-39 164.9 144 59.7
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 6.0e-39 164.5 143 61.5
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 7.8e-39 164.1 143 61.5
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 7.8e-39 164.1 169 55.0
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 7.8e-39 164.1 144 61.8
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 7.8e-39 164.1 143 62.2
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.0e-38 163.7 123 67.5
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 1.3e-38 163.3 141 63.1
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.3e-38 163.3 112 72.3
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 1.7e-38 162.9 156 60.9
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.3e-38 162.5 112 72.3
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 3.0e-38 162.2 129 65.9
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 3.9e-38 161.8 140 62.9
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 3.9e-38 161.8 87 89.7
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.9e-38 161.8 144 63.2
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 3.9e-38 161.8 140 64.3
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 5.1e-38 161.4 143 60.8
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 5.1e-38 161.4 145 60.0
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 6.6e-38 161.0 144 61.1
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 6.6e-38 161.0 144 61.1
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 6.6e-38 161.0 140 60.7
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 6.6e-38 161.0 120 70.8
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 8.7e-38 160.6 147 63.9
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.1e-37 160.2 143 64.3
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.1e-37 160.2 112 70.5
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.5e-37 159.8 133 63.2
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.5e-37 159.8 144 63.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.9e-37 159.5 144 61.1
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.9e-37 159.5 145 60.0
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.5e-37 159.1 102 74.5
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.3e-37 158.7 92 82.6
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 3.3e-37 158.7 88 84.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 3.3e-37 158.7 148 58.1
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 5.6e-37 157.9 141 61.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 7.3e-37 157.5 140 60.0
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 1.6e-36 156.4 111 71.2
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.1e-36 156.0 148 62.8
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 6.2e-36 154.5 140 59.3
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 8.1e-36 154.1 141 61.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.4e-35 152.5 92 78.3
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 9.0e-35 150.6 114 69.3
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 9.0e-35 150.6 98 75.5
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 4.5e-34 148.3 93 71.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.5e-34 148.3 90 81.1
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 7.6e-34 147.5 149 57.0
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.3e-33 146.7 116 69.0
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.9e-33 145.6 87 78.2
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 3.8e-33 145.2 137 57.7
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 3.8e-33 145.2 137 57.7
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 7.1e-32 141.0 114 61.4
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 7.1e-32 141.0 115 63.5
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.2e-31 140.2 91 76.9
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.2e-31 140.2 93 71.0
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.6e-31 139.8 112 65.2
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 2.1e-31 139.4 91 76.9
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.0e-30 137.1 88 77.3
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.0e-30 137.1 112 64.3
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 5.6e-29 131.3 74 82.4
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.1e-28 129.4 74 79.7
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.1e-27 127.1 71 81.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.0e-27 125.2 129 55.8
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.5e-26 123.2 66 84.8
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.6e-26 122.5 144 52.8
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 9.9e-26 120.6 144 52.1
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 2.7e-23 112.5 102 53.9
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 4.6e-23 111.7 87 69.0
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-21 107.1 91 63.7
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.8e-17 92.0 102 50.0
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.8e-12 75.9 108 38.9
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 3.7e-12 75.5 46 73.9
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 2.6e-10 69.3 105 40.0
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.0e-09 67.4 80 42.5
Dinv35698 Davidia involucrata HOM05D007368 ORTHO05D009330 2.3e-06 56.2 30 90.0


User provided reference genes

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