Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017369 Carpinus fangiana HOM05D001158 ORTHO05D000964 9.3e-30 132.9 67 100.0
Haze_20802 Corylus avellana HOM05D001158 ORTHO05D000964 1.5e-16 89.0 44 95.5
QL07p048538 Quercus lobata HOM05D001158 ORTHO05D000964 9.9e-16 86.3 46 89.1
QL07p048450 Quercus lobata HOM05D001158 ORTHO05D000964 1.0e-12 76.3 39 94.9
TAR633G1883 Trochodendron aralioides HOM05D001158 ORTHO05D000964 3.9e-12 74.3 46 76.1
Rhsim04G0157600 Rhododendron simsii HOM05D001158 ORTHO05D000964 7.4e-11 70.1 46 73.9
FAN14G4771 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.7e-10 67.8 43 69.8
MD12G1142700 Malus domestica HOM05D001158 ORTHO05D000964 3.7e-10 67.8 45 68.9
vmacro08650 Vaccinium macrocarpon HOM05D001158 ORTHO05D000964 4.8e-10 67.4 47 70.2
FvH4_6g13620 Fragaria vesca HOM05D001158 ORTHO05D000964 6.2e-10 67.0 43 67.4
FAN05G1968 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.8e-09 65.5 43 67.4
Dinv35594 Davidia involucrata HOM05D001158 ORTHO05D000964 4.0e-09 64.3 47 70.2
GSVIVG01034164001 Vitis vinifera HOM05D001158 ORTHO05D000964 9.0e-09 63.2 47 66.0
Actinidia13147 Actinidia chinensis HOM05D001158 ORTHO05D000964 1.5e-08 62.4 47 63.8
Prupe.6G256400 Prunus persica HOM05D001158 ORTHO05D000964 1.5e-08 62.4 45 64.4
Nn2g13359 Nelumbo nucifera HOM05D001158 ORTHO05D000964 2.0e-08 62.0 46 63.0
Oeu053462.1 Olea europaea HOM05D001158 ORTHO05D000964 2.0e-08 62.0 45 66.7
FAN09G0889 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.4e-08 61.2 43 65.1
PSO541G1198 Papaver somniferum HOM05D001158 ORTHO05D000964 5.8e-08 60.5 43 67.4
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 1.0e-07 59.7 45 64.4
Nn2g11124 Nelumbo nucifera HOM05D001158 ORTHO05D000964 1.3e-07 59.3 46 60.9
PSO541G4880 Papaver somniferum HOM05D001158 ORTHO05D000964 1.3e-07 59.3 43 65.1
PSO675G8934 Papaver somniferum HOM05D001158 ORTHO05D000964 1.3e-07 59.3 43 65.1
PSO675G1703 Papaver somniferum HOM05D001158 ORTHO05D000964 1.7e-07 58.9 43 65.1
CDE09G0348 Ceratophyllum demersum HOM05D001158 ORTHO05D000964 2.2e-07 58.5 45 64.4
CDE09G0461 Ceratophyllum demersum HOM05D001158 ORTHO05D000964 2.2e-07 58.5 45 64.4
CDE09G0857 Ceratophyllum demersum HOM05D001158 ORTHO05D000964 2.2e-07 58.5 45 64.4
Oeu035184.1 Olea europaea HOM05D001158 ORTHO05D000964 2.9e-07 58.2 45 64.4
PSO541G2545 Papaver somniferum HOM05D001158 ORTHO05D000964 2.9e-07 58.2 43 65.1
PSO675G4373 Papaver somniferum HOM05D001158 ORTHO05D000964 2.9e-07 58.2 43 62.8
Potri.010G203100 Populus trichocarpa HOM05D001158 ORTHO05D000964 2.9e-07 58.2 45 64.4
Atru.chr12.438 Acer truncatum HOM05D001158 ORTHO05D000964 4.9e-07 57.4 48 60.4
Dinv26024 Davidia involucrata HOM05D001158 ORTHO05D000964 4.9e-07 57.4 48 58.3
Oeu048240.1 Olea europaea HOM05D001158 ORTHO05D000964 4.9e-07 57.4 45 62.2
Sabra10G0156700 Salix brachista HOM05D001158 ORTHO05D000964 6.5e-07 57.0 45 62.2
CANSAT56G0861 Cannabis sativa HOM05D001158 ORTHO05D000964 8.4e-07 56.6 48 56.2
CANSAT56G2755 Cannabis sativa HOM05D001158 ORTHO05D000964 8.4e-07 56.6 48 56.2
Cc06_g02580 Coffea canephora HOM05D001158 ORTHO05D000964 8.4e-07 56.6 43 62.8
PSO384G0672 Papaver somniferum HOM05D001158 ORTHO05D000964 8.4e-07 56.6 43 62.8
Atru.chr12.437 Acer truncatum HOM05D001158 ORTHO05D000964 1.1e-06 56.2 48 58.3
Dinv03041 Davidia involucrata HOM05D001158 ORTHO05D000964 1.1e-06 56.2 48 58.3
Nn2g11123 Nelumbo nucifera HOM05D001158 ORTHO05D000964 1.4e-06 55.8 43 60.5
MSTRG.27371 Avicennia marina HOM05D001158 ORTHO05D000964 1.9e-06 55.5 48 58.3
CiPaw.02G184700 Carya illinoinensis HOM05D001158 ORTHO05D000964 1.9e-06 55.5 48 58.3
PSO339G3088 Papaver somniferum HOM05D001158 ORTHO05D000964 1.9e-06 55.5 44 59.1
PSO384G4587 Papaver somniferum HOM05D001158 ORTHO05D000964 2.5e-06 55.1 44 59.1
unitig_88.g27758 Utricularia gibba HOM05D001158 ORTHO05D000964 2.5e-06 55.1 45 55.6
GSVIVG01016533001 Vitis vinifera HOM05D001158 ORTHO05D000964 2.5e-06 55.1 48 56.2
MBI05_g28391_MAGBIO Magnolia biondii HOM05D001158 ORTHO05D000964 3.2e-06 54.7 45 60.0
Thecc.10G040600 Theobroma cacao HOM05D001158 ORTHO05D000964 3.2e-06 54.7 48 54.2
CDE02G4597 Ceratophyllum demersum HOM05D001158 ORTHO05D000964 4.2e-06 54.3 43 60.5
CsaV3_5G026720 Cucumis sativus L. HOM05D001158 ORTHO05D000964 4.2e-06 54.3 48 58.3
Migut.F00781 Erythranthe guttata HOM05D001158 ORTHO05D000964 4.2e-06 54.3 45 60.0
Migut.F01490 Erythranthe guttata HOM05D001158 ORTHO05D000964 4.2e-06 54.3 43 62.8
CiPaw.01G288200 Carya illinoinensis HOM05D001158 ORTHO05D000964 5.5e-06 53.9 48 56.2
ECA248G2659 Erigeron canadensis HOM05D001158 ORTHO05D000964 5.5e-06 53.9 44 59.1
Sed0015047 Sechium edule HOM05D001158 ORTHO05D000964 5.5e-06 53.9 45 60.0
Cpa.g.sc1.414 Carica papaya HOM05D001158 ORTHO05D000964 7.1e-06 53.5 45 55.6
Cfa001467 Carpinus fangiana HOM05D001158 ORTHO05D000964 7.1e-06 53.5 48 54.2
Oeu048239.1 Olea europaea HOM05D001158 ORTHO05D000964 7.1e-06 53.5 45 57.8
Cc02_g07750 Coffea canephora HOM05D001158 ORTHO05D000964 9.3e-06 53.1 43 55.8
Duzib114G0179 Durio zibethinus HOM05D001158 ORTHO05D000964 9.3e-06 53.1 45 60.0
Manes.07G116900 Manihot esculenta HOM05D001158 ORTHO05D000964 9.3e-06 53.1 48 54.2
Os01g0841700 Oryza sativa ssp. japonica HOM05D001158 ORTHO05D000964 9.3e-06 53.1 47 57.4
RcHm_v2.0_Chr1g0367731 Rosa chinensis HOM05D001158 ORTHO05D000964 9.3e-06 53.1 45 57.8


User provided reference genes

Program Settings