Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 9.9e-91 336.7 157 100.0
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.5e-75 284.6 157 87.3
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.1e-49 200.3 162 64.8
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 1.9e-49 199.5 163 61.3
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 3.8e-42 175.3 137 64.2
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 9.4e-41 170.6 152 59.2
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 2.3e-39 166.0 143 59.4
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 6.7e-39 164.5 164 55.5
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.1e-38 163.7 110 67.3
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.1e-38 163.7 139 58.3
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.1e-38 163.7 142 57.7
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.5e-38 163.3 152 59.2
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-38 163.3 139 58.3
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.0e-38 162.9 153 59.5
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 3.3e-38 162.2 158 52.5
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 4.4e-38 161.8 156 51.9
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.4e-38 161.0 139 57.6
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 9.7e-38 160.6 160 55.6
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 2.2e-37 159.5 160 53.8
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 2.2e-37 159.5 152 55.9
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.8e-37 159.1 158 50.0
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.8e-37 159.1 154 55.8
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.7e-37 158.7 92 78.3
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 4.8e-37 158.3 151 55.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 4.8e-37 158.3 92 77.2
Haze_20813 Corylus avellana HOM05D003730 ORTHO05D004458 6.3e-37 157.9 86 87.2
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 8.2e-37 157.5 134 62.7
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.1e-36 157.1 159 53.5
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 1.1e-36 157.1 156 51.9
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.4e-36 156.8 135 57.8
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.4e-36 156.8 162 53.7
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 5.3e-36 154.8 99 71.7
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 9.1e-36 154.1 147 55.8
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 9.1e-36 154.1 163 52.1
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.2e-35 153.7 156 53.8
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.2e-35 153.7 87 78.2
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.6e-35 153.3 95 76.8
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 3.5e-35 152.1 80 87.5
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 4.5e-35 151.8 113 62.8
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 7.7e-35 151.0 96 70.8
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.0e-34 150.6 133 56.4
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.0e-34 150.6 158 50.6
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.0e-34 150.6 93 71.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.7e-34 149.8 93 74.2
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.7e-34 149.8 155 49.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.7e-34 149.8 85 78.8
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 2.9e-34 149.1 154 53.9
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.8e-34 148.7 114 62.3
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 5.0e-34 148.3 157 51.0
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 5.0e-34 148.3 134 56.7
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 5.0e-34 148.3 84 81.0
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 5.0e-34 148.3 87 78.2
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 6.5e-34 147.9 93 69.9
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 6.5e-34 147.9 99 68.7
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 6.5e-34 147.9 122 59.8
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 6.5e-34 147.9 133 57.1
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 6.5e-34 147.9 94 69.1
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 8.5e-34 147.5 92 69.6
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.1e-33 147.1 92 70.7
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.5e-33 146.7 102 66.7
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 1.5e-33 146.7 106 67.0
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 3.2e-33 145.6 131 55.7
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 7.2e-33 144.4 107 65.4
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 7.2e-33 144.4 147 53.1
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 9.4e-33 144.1 97 72.2
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.2e-32 143.7 158 51.9
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.2e-32 143.7 158 51.9
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.6e-32 143.3 99 67.7
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.6e-32 143.3 99 67.7
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 2.1e-32 142.9 94 68.1
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 6.1e-32 141.4 84 77.4
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.0e-31 140.6 84 73.8
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 1.4e-31 140.2 90 67.8
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 5.2e-31 138.3 86 74.4
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.7e-31 137.9 76 80.3
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 4.4e-30 135.2 140 52.9
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 4.4e-30 135.2 76 78.9
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 5.7e-30 134.8 77 75.3
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 7.5e-30 134.4 159 48.4
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 7.5e-30 134.4 99 63.6
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.7e-29 133.3 74 79.7
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.7e-29 133.3 147 51.0
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.8e-29 132.5 91 64.8
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 2.8e-29 132.5 66 83.3
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 1.1e-28 130.6 90 62.2
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.1e-28 130.6 81 77.8
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.4e-28 129.4 84 67.9
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 2.4e-28 129.4 74 78.4
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 3.1e-28 129.0 74 77.0
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.0e-27 126.3 73 82.2
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.0e-26 124.0 73 76.7
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.3e-26 123.6 76 75.0
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.9e-26 122.5 78 73.1
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 8.5e-26 120.9 71 80.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.6e-24 115.5 140 48.6
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.2e-22 110.5 76 60.5
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.2e-22 110.5 59 79.7
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.6e-22 109.4 74 67.6
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 9.5e-17 90.9 81 56.8
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.8e-15 86.7 68 51.5
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 4.0e-15 85.5 97 53.6


User provided reference genes

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