Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017337 Carpinus fangiana HOM05D000720 ORTHO05D000549 1.1e-36 156.0 74 100.0
Cfa000352 Carpinus fangiana HOM05D000720 ORTHO05D000549 7.8e-30 133.3 74 87.8
Cfa004109 Carpinus fangiana HOM05D000720 ORTHO05D000549 9.6e-28 126.3 89 74.2
Haze_15302 Corylus avellana HOM05D000720 ORTHO05D000549 2.8e-27 124.8 89 73.0
CiPaw.01G006200 Carya illinoinensis HOM05D000720 ORTHO05D000549 4.5e-17 90.9 68 67.6
TWI09G0357 Tripterygium wilfordii HOM05D000720 ORTHO05D000549 9.3e-15 83.2 64 68.8
Manes.12G110600 Manihot esculenta HOM05D000720 ORTHO05D000549 1.6e-14 82.4 64 67.2
Duzib147G0835 Durio zibethinus HOM05D000720 ORTHO05D000549 3.5e-14 81.3 65 64.6
Cpa.g.sc6.40 Carica papaya HOM05D000720 ORTHO05D000549 1.1e-12 76.3 62 62.9
Thecc.01G069800 Theobroma cacao HOM05D000720 ORTHO05D000549 1.5e-12 75.9 66 60.6
CANSAT01G0180 Cannabis sativa HOM05D000720 ORTHO05D000549 2.8e-11 71.6 61 60.7
Lalb_Chr05g0213611 Lupinus albus HOM05D000720 ORTHO05D000549 2.8e-11 71.6 69 55.1
Gohir.A12G082165 Gossypium hirsutum HOM05D000720 ORTHO05D000549 3.7e-11 71.2 66 57.6
Duzib187G1571 Durio zibethinus HOM05D000720 ORTHO05D000549 4.8e-11 70.9 67 58.2
Gohir.A11G216500 Gossypium hirsutum HOM05D000720 ORTHO05D000549 6.2e-11 70.5 66 59.1
Sabra07G0046900 Salix brachista HOM05D000720 ORTHO05D000549 6.2e-11 70.5 63 65.1
Duzib264G0126 Durio zibethinus HOM05D000720 ORTHO05D000549 8.1e-11 70.1 65 58.5
Gorai.007G222000 Gossypium raimondii HOM05D000720 ORTHO05D000549 1.4e-10 69.3 66 59.1
Gorai.008G081100 Gossypium raimondii HOM05D000720 ORTHO05D000549 1.4e-10 69.3 67 56.7
Gohir.D11G206900 Gossypium hirsutum HOM05D000720 ORTHO05D000549 1.8e-10 68.9 66 59.1
Lj7A91T10 Lonicera japonica HOM05D000720 ORTHO05D000549 2.4e-10 68.6 59 61.0
Glyma.01G192600 Glycine max HOM05D000720 ORTHO05D000549 4.0e-10 67.8 66 57.6
Ca_24717_v3 Cicer arietinum L. HOM05D000720 ORTHO05D000549 5.3e-10 67.4 64 60.9
Gohir.D12G073700 Gossypium hirsutum HOM05D000720 ORTHO05D000549 5.3e-10 67.4 67 55.2
arahy.Tifrunner.gnm1.ann1.Z62C6M Arachis hypogaea HOM05D000720 ORTHO05D000549 6.9e-10 67.0 62 62.9
COL.COLO4_11550 Corchorus olitorius HOM05D000720 ORTHO05D000549 9.0e-10 66.6 65 58.5
THA.LOC104807853 Tarenaya hassleriana HOM05D000720 ORTHO05D000549 1.2e-09 66.2 67 50.7
TWI73G1143 Tripterygium wilfordii HOM05D000720 ORTHO05D000549 1.5e-09 65.9 56 60.7
Glyma.11G049300 Glycine max HOM05D000720 ORTHO05D000549 2.6e-09 65.1 66 56.1
arahy.Tifrunner.gnm1.ann1.C3HPWP Arachis hypogaea HOM05D000720 ORTHO05D000549 3.4e-09 64.7 62 59.7
TWI53G1362 Tripterygium wilfordii HOM05D000720 ORTHO05D000549 3.4e-09 64.7 64 57.8
Manes.13G113000 Manihot esculenta HOM05D000720 ORTHO05D000549 5.8e-09 63.9 61 59.0
Potri.007G053600 Populus trichocarpa HOM05D000720 ORTHO05D000549 5.8e-09 63.9 64 60.9
Dinv26912 Davidia involucrata HOM05D000720 ORTHO05D000549 1.0e-08 63.2 60 58.3
Lj2g0028085 Lotus japonicus HOM05D000720 ORTHO05D000549 1.0e-08 63.2 64 56.2
Nitab4.5_0006069g0010 Nicotiana tabacum HOM05D000720 ORTHO05D000549 1.7e-08 62.4 61 57.4
Sopen02g037120 Solanum pennellii HOM05D000720 ORTHO05D000549 1.7e-08 62.4 70 51.4
Nitab4.5_0000651g0110 Nicotiana tabacum HOM05D000720 ORTHO05D000549 2.9e-08 61.6 61 55.7
Ca_13923_v3 Cicer arietinum L. HOM05D000720 ORTHO05D000549 3.8e-08 61.2 67 55.2
TPR.G23857 Trifolium pratense HOM05D000720 ORTHO05D000549 3.8e-08 61.2 64 54.7
Psat2g170880 Pisum sativum HOM05D000720 ORTHO05D000549 4.9e-08 60.8 65 52.3
Prupe.6G223100 Prunus persica HOM05D000720 ORTHO05D000549 4.9e-08 60.8 67 56.7
QL06p039808 Quercus lobata HOM05D000720 ORTHO05D000549 4.9e-08 60.8 61 62.3
Solyc02g092550.3 Solanum lycopersicum HOM05D000720 ORTHO05D000549 4.9e-08 60.8 70 51.4
Lj4g0022699 Lotus japonicus HOM05D000720 ORTHO05D000549 1.9e-07 58.9 62 56.5
Potri.005G145500 Populus trichocarpa HOM05D000720 ORTHO05D000549 1.9e-07 58.9 65 60.0
RcHm_v2.0_Chr2g0107561 Rosa chinensis HOM05D000720 ORTHO05D000549 1.9e-07 58.9 63 55.6
Lalb_Chr16g0378801 Lupinus albus HOM05D000720 ORTHO05D000549 2.5e-07 58.5 67 53.7
VMungo1215G2885 Vigna mungo HOM05D000720 ORTHO05D000549 2.5e-07 58.5 67 50.7
GSVIVG01000141001 Vitis vinifera HOM05D000720 ORTHO05D000549 2.5e-07 58.5 70 51.4
TPR.G20943 Trifolium pratense HOM05D000720 ORTHO05D000549 3.2e-07 58.2 62 54.8
MD00G1015800 Malus domestica HOM05D000720 ORTHO05D000549 4.2e-07 57.8 45 64.4
Phvul.002G012200 Phaseolus vulgaris HOM05D000720 ORTHO05D000549 4.2e-07 57.8 65 50.8
Medtr5g015880 Medicago truncatula HOM05D000720 ORTHO05D000549 5.5e-07 57.4 63 57.1
Hma1.2p1_0730F.1_g209850 Hydrangea macrophylla HOM05D000720 ORTHO05D000549 7.1e-07 57.0 61 52.5
Hma1.2p1_2675F.1_g326715 Hydrangea macrophylla HOM05D000720 ORTHO05D000549 7.1e-07 57.0 61 52.5
Medtr4g095600 Medicago truncatula HOM05D000720 ORTHO05D000549 7.1e-07 57.0 65 49.2
Ciclev10026374m.g Citrus clementina HOM05D000720 ORTHO05D000549 9.3e-07 56.6 66 53.0
Peaxi162Scf00264g00012 Petunia axillaris HOM05D000720 ORTHO05D000549 1.2e-06 56.2 61 52.5
Psat0s2166g0120 Pisum sativum HOM05D000720 ORTHO05D000549 1.2e-06 56.2 65 47.7
Actinidia32828 Actinidia chinensis HOM05D000720 ORTHO05D000549 2.1e-06 55.5 60 53.3
Gohir.A11G048300 Gossypium hirsutum HOM05D000720 ORTHO05D000549 2.1e-06 55.5 64 56.2
MD15G1294700 Malus domestica HOM05D000720 ORTHO05D000549 2.1e-06 55.5 45 62.2
Nn1g04600 Nelumbo nucifera HOM05D000720 ORTHO05D000549 2.1e-06 55.5 82 42.7
Dinv30075 Davidia involucrata HOM05D000720 ORTHO05D000549 3.5e-06 54.7 67 53.7
FAN26G1895 Fragaria x ananassa HOM05D000720 ORTHO05D000549 3.5e-06 54.7 66 51.5
Cc07_g06900 Coffea canephora HOM05D000720 ORTHO05D000549 4.6e-06 54.3 61 55.7
FAN23G2163 Fragaria x ananassa HOM05D000720 ORTHO05D000549 4.6e-06 54.3 65 52.3
Sabra05G0116400 Salix brachista HOM05D000720 ORTHO05D000549 4.6e-06 54.3 63 57.1
CSS0006814 Camellia sinensis var. sinensis HOM05D000720 ORTHO05D000549 6.0e-06 53.9 41 68.3
FvH4_1g17380 Fragaria vesca HOM05D000720 ORTHO05D000549 6.0e-06 53.9 66 51.5
FAN19G1390 Fragaria x ananassa HOM05D000720 ORTHO05D000549 6.0e-06 53.9 66 51.5
FAN28G1330 Fragaria x ananassa HOM05D000720 ORTHO05D000549 6.0e-06 53.9 66 51.5
Phvul.003G236200 Phaseolus vulgaris HOM05D000720 ORTHO05D000549 6.0e-06 53.9 62 54.8
VMungo0251G0022 Vigna mungo HOM05D000720 ORTHO05D000549 6.0e-06 53.9 62 54.8


User provided reference genes

Program Settings