Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017315 Carpinus fangiana HOM05D000029 ORTHO05D008832 5.5e-65 250.8 120 100.0
Rhsim10G0084900 Rhododendron simsii HOM05D000029 ORTHO05D008832 1.3e-21 106.7 80 66.2
RcHm_v2.0_Chr1g0348221 Rosa chinensis HOM05D000071 ORTHO05D000029 5.5e-09 64.7 72 50.0
TAR626G1881 Trochodendron aralioides HOM05D000029 ORTHO05D000854 9.5e-09 63.9 42 61.9
Dinv07943 Davidia involucrata HOM05D000029 ORTHO05D000854 2.8e-08 62.4 46 56.5
Dinv18412 Davidia involucrata HOM05D000029 ORTHO05D000854 2.8e-08 62.4 46 56.5
Aqoxy1G01351 Aquilegia oxysepala HOM05D000029 ORTHO05D000854 6.1e-08 61.2 53 49.1
FAN10G4146 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.4e-07 60.1 65 49.2
Potri.008G176900 Populus trichocarpa HOM05D000033 ORTHO05D001688 1.8e-07 59.7 72 47.2
FAN25G3225 Fragaria x ananassa HOM05D000132 ORTHO05D000058 3.0e-07 58.9 106 35.8
Nitab4.5_0008614g0020 Nicotiana tabacum HOM05D000029 ORTHO05D002162 3.0e-07 58.9 85 34.1
THA.LOC104798420 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 4.0e-07 58.5 43 60.5
Aqoxy1G00303 Aquilegia oxysepala HOM05D000033 ORTHO05D007591 6.8e-07 57.8 67 44.8
Gohir.A04G029508 Gossypium hirsutum HOM05D000071 ORTHO05D000029 6.8e-07 57.8 70 40.0
Lalb_Chr03g0043471 Lupinus albus HOM05D000033 ORTHO05D001688 8.9e-07 57.4 73 42.5
AL8G43410 Arabidopsis lyrata HOM05D000029 ORTHO05D000854 2.0e-06 56.2 67 43.3
Lj3g0000840 Lotus japonicus HOM05D000094 ORTHO05D000455 2.0e-06 56.2 85 34.1
Lalb_Chr04g0249091 Lupinus albus HOM05D000029 ORTHO05D000854 2.0e-06 56.2 46 54.3
Carub.0008s2660 Capsella rubella HOM05D000029 ORTHO05D000854 2.6e-06 55.8 43 55.8
ECA246G2247 Erigeron canadensis HOM05D000029 ORTHO05D000854 2.6e-06 55.8 36 61.1
Migut.L00440 Erythranthe guttata HOM05D000029 ORTHO05D000854 2.6e-06 55.8 46 50.0
SGA_v2.0_scaffold21G09347 Striga asiatica HOM05D000168 ORTHO05D001351 2.6e-06 55.8 63 44.4
CAN.G280.13 Capsicum annuum HOM05D000071 ORTHO05D000029 3.4e-06 55.5 79 39.2
CARHR279690 Cardamine hirsuta HOM05D000029 ORTHO05D000854 3.4e-06 55.5 43 58.1
HanXRQChr12g0377181 Helianthus annuus HOM05D000029 ORTHO05D000854 3.4e-06 55.5 69 40.6
Lsat_1_v5_gn_2_81641 Lactuca sativa HOM05D000029 ORTHO05D000854 3.4e-06 55.5 36 61.1
AT5G65700 Arabidopsis thaliana HOM05D000029 ORTHO05D000854 4.4e-06 55.1 67 43.3
CSS0041945 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 4.4e-06 55.1 34 67.6
Thhalv10003584m.g Eutrema salsugineum HOM05D000029 ORTHO05D000854 4.4e-06 55.1 43 58.1
FAN16G3584 Fragaria x ananassa HOM05D000132 ORTHO05D000058 4.4e-06 55.1 101 35.6
RcHm_v2.0_Chr5g0082631 Rosa chinensis HOM05D000071 ORTHO05D000029 4.4e-06 55.1 66 42.4
Actinidia16402 Actinidia chinensis HOM05D000029 ORTHO05D000854 5.7e-06 54.7 37 62.2
CARHR292940 Cardamine hirsuta HOM05D000033 ORTHO05D002493 5.7e-06 54.7 93 37.6
FvH4_4g04540 Fragaria vesca HOM05D000132 ORTHO05D000058 5.7e-06 54.7 89 39.3
Psat7g249200 Pisum sativum HOM05D000033 ORTHO05D001688 5.7e-06 54.7 109 33.9
Sp2g28800 Schrenkiella parvula HOM05D000029 ORTHO05D000854 5.7e-06 54.7 43 55.8
THA.LOC104819280 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 5.7e-06 54.7 34 64.7
TPR.G26083 Trifolium pratense HOM05D000029 ORTHO05D002544 5.7e-06 54.7 73 39.7
Aa31LG1G16360 Aethionema arabicum HOM05D000029 ORTHO05D000854 7.5e-06 54.3 34 64.7
MD05G1139100 Malus domestica HOM05D000029 ORTHO05D000854 7.5e-06 54.3 77 39.0
CARHR168150 Cardamine hirsuta HOM05D000033 ORTHO05D007591 9.8e-06 53.9 68 42.6
FAN19G0067 Fragaria x ananassa HOM05D000033 ORTHO05D002493 9.8e-06 53.9 80 37.5
Lsat_1_v5_gn_4_159241 Lactuca sativa HOM05D000029 ORTHO05D000854 9.8e-06 53.9 67 40.3
Lj4C171T2 Lonicera japonica HOM05D000029 ORTHO05D000854 9.8e-06 53.9 35 62.9
Nitab4.5_0000396g0120 Nicotiana tabacum HOM05D000029 ORTHO05D000854 9.8e-06 53.9 31 67.7
Nitab4.5_0004221g0020 Nicotiana tabacum HOM05D000029 ORTHO05D002544 9.8e-06 53.9 101 36.6
Sed0014573 Sechium edule HOM05D000029 ORTHO05D000854 9.8e-06 53.9 66 40.9


User provided reference genes

Program Settings