Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.6e-45 186.0 117 100.0
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.5e-43 179.5 117 82.1
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.2e-34 149.1 115 63.5
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 7.0e-33 144.1 115 64.3
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.6e-32 142.9 115 64.3
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.0e-32 142.5 115 63.5
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.0e-32 142.5 115 63.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 2.7e-32 142.1 115 64.3
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.0e-31 140.2 115 67.8
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-31 139.8 115 62.6
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 3.8e-31 138.3 114 62.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 6.6e-31 137.5 115 62.6
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.3e-30 134.0 115 61.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 9.5e-30 133.7 109 73.4
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.2e-29 133.3 109 75.2
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 4.7e-29 131.3 116 78.4
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 8.0e-29 130.6 115 57.4
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.8e-28 129.4 119 61.3
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.0e-28 128.6 119 58.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 5.2e-28 127.9 117 59.0
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 8.9e-28 127.1 120 57.5
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.2e-27 126.7 115 60.0
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.2e-27 126.7 117 58.1
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.5e-27 126.3 115 54.8
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 3.4e-27 125.2 119 58.8
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.4e-27 124.8 117 58.1
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 5.8e-27 124.4 115 58.3
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.7e-26 122.9 115 54.8
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 1.7e-26 122.9 116 56.9
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 4.9e-26 121.3 116 58.6
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 4.9e-26 121.3 117 63.2
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 6.4e-26 120.9 116 58.6
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 6.4e-26 120.9 116 58.6
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.4e-26 120.9 115 53.9
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 6.4e-26 120.9 117 64.1
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 6.4e-26 120.9 118 55.1
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 1.1e-25 120.2 102 61.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 52.5
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 5.4e-25 117.9 118 57.6
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 5.4e-25 117.9 116 55.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 7.0e-25 117.5 116 57.8
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 9.2e-25 117.1 115 55.7
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.2e-24 116.7 117 55.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 2.7e-24 115.5 117 55.6
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.5e-24 115.2 113 57.5
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 7.8e-24 114.0 67 76.1
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.0e-23 113.6 119 53.8
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.3e-23 113.2 118 54.2
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.7e-23 112.8 67 74.6
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.7e-23 112.8 116 69.8
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 2.3e-23 112.5 117 51.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.3e-23 112.5 117 52.1
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 3.0e-23 112.1 66 77.3
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 6.6e-23 110.9 118 52.5
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 8.6e-23 110.5 115 53.9
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.1e-22 110.2 115 53.0
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.5e-22 109.8 121 59.5
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.5e-22 109.8 64 73.4
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 2.5e-22 109.0 115 53.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.5e-22 109.0 117 53.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 3.3e-22 108.6 118 62.7
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.3e-22 108.2 115 51.3
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 4.3e-22 108.2 113 52.2
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 5.6e-22 107.8 117 53.0
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 5.6e-22 107.8 117 53.0
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 7.3e-22 107.5 117 51.3
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 7.3e-22 107.5 115 51.3
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.2e-21 106.7 117 52.1
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.6e-21 106.3 115 54.8
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.8e-21 105.5 116 48.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.6e-21 105.1 118 51.7
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 6.2e-21 104.4 116 62.1
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.1e-20 103.6 120 49.2
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.1e-20 103.6 120 48.3
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.4e-20 103.2 117 53.0
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.4e-20 103.2 137 46.0
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 1.4e-20 103.2 120 48.3
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.3e-20 102.4 62 75.8
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 8.9e-20 100.5 115 48.7
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 8.9e-20 100.5 115 49.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.5e-19 99.8 70 68.6
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.5e-19 99.8 117 49.6
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.0e-19 99.4 117 50.4
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.4e-19 98.2 108 50.9
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.3e-18 96.7 115 49.6
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.2e-18 95.9 116 47.4
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 2.9e-18 95.5 115 48.7
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 4.9e-18 94.7 68 64.7
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 6.4e-18 94.4 69 65.2
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 8.3e-18 94.0 115 49.6
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.3e-18 94.0 61 70.5
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.4e-17 93.2 118 48.3
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.9e-17 92.8 105 54.3
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 2.4e-17 92.4 70 64.3
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 4.1e-17 91.7 120 48.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 5.4e-17 91.3 119 48.7
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 7.0e-17 90.9 118 48.3
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 9.2e-17 90.5 106 50.9
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.2e-16 90.1 105 52.4
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.2e-16 90.1 107 47.7
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.7e-16 89.0 64 67.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.7e-16 89.0 64 67.2
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 6.0e-16 87.8 100 58.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 6.0e-16 87.8 107 48.6
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 7.8e-16 87.4 55 69.1
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.3e-14 82.0 56 67.9
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 9.5e-14 80.5 71 54.9
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.6e-13 79.7 70 58.6
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 8.1e-13 77.4 83 62.7
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.8e-12 76.3 56 64.3
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.9e-09 66.2 67 50.7
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 3.2e-09 65.5 115 40.9
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 5.4e-09 64.7 67 47.8
CiPaw.09G207700 Carya illinoinensis HOM05D007113 ORTHO05D008859 6.0e-08 61.2 123 40.7
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.9e-06 56.2 40 62.5


User provided reference genes

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