Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 4.4e-96 354.8 197 100.0
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 1.0e-84 317.0 192 93.8
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.7e-55 219.9 207 71.5
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 3.9e-52 208.8 206 65.5
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 2.5e-46 189.5 91 98.9
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 1.2e-45 187.2 205 61.5
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 3.5e-45 185.7 205 59.5
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 6.0e-45 184.9 206 58.7
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 2.1e-42 176.4 200 60.0
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 4.8e-42 175.3 188 59.0
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 6.9e-41 171.4 142 58.5
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 6.9e-41 171.4 200 53.5
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.0e-41 171.0 206 54.9
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.5e-40 170.2 206 52.9
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 2.6e-40 169.5 202 55.4
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 3.4e-40 169.1 201 57.2
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.4e-40 169.1 142 57.7
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 1.3e-39 167.2 210 55.2
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 6.5e-39 164.9 210 56.7
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 1.9e-38 163.3 207 58.5
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 2.5e-38 162.9 204 58.8
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 2.5e-38 162.9 204 58.8
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 4.2e-38 162.2 205 60.0
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.2e-38 162.2 199 49.7
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 9.3e-38 161.0 202 53.5
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 1.6e-37 160.2 202 55.4
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 4.6e-37 158.7 202 48.0
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 1.0e-36 157.5 204 54.9
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 5.1e-36 155.2 198 49.5
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 1.1e-35 154.1 204 51.5
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 4.3e-35 152.1 202 51.5
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 1.3e-34 150.6 185 55.7
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 4.1e-33 145.6 204 52.5
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 1.0e-31 141.0 200 52.0
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 1.0e-31 141.0 201 53.2
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 1.9e-30 136.7 199 43.7
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 5.1e-28 128.6 129 55.0
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 2.6e-24 116.3 152 53.9
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 1.1e-22 110.9 219 45.2
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 5.1e-20 102.1 147 44.9
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 3.7e-18 95.9 176 47.7
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 9.1e-17 91.3 108 63.0
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 2.2e-15 86.7 165 37.6
MBI14_g41802_MAGBIO Magnolia biondii HOM05D008730 ORTHO05D010922 1.5e-06 57.4 47 57.4


User provided reference genes

Program Settings