Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 7.8e-91 337.0 162 100.0
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 9.0e-47 190.7 91 98.9
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 2.1e-43 179.5 91 94.5
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.7e-24 116.7 95 64.2
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 6.3e-24 114.8 97 57.7
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 5.0e-21 105.1 97 52.6
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.0e-21 105.1 97 52.6
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.5e-20 102.8 97 51.5
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 4.7e-19 98.6 95 53.7
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.0e-18 95.5 97 48.5
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 5.2e-18 95.1 97 49.5
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.7e-16 90.1 97 46.4
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 6.3e-16 88.2 96 50.0
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 1.4e-15 87.0 101 51.5
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 7.0e-15 84.7 96 46.9
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.5e-14 82.0 95 47.4
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 1.3e-13 80.5 96 46.9
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 2.9e-13 79.3 98 48.0
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 2.5e-12 76.3 95 47.4
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 4.2e-12 75.5 98 46.9
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 2.1e-11 73.2 95 46.3
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 3.6e-11 72.4 80 50.0
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 8.0e-11 71.2 92 45.7
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 8.0e-11 71.2 92 45.7
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 8.0e-11 71.2 95 40.0
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 1.0e-10 70.9 103 45.6
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 1.0e-10 70.9 95 41.1
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 1.8e-10 70.1 99 45.5
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 4.0e-10 68.9 96 45.8
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 5.2e-10 68.6 100 39.0
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 1.2e-09 67.4 95 40.0
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 5.7e-09 65.1 97 40.2
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 1.7e-08 63.5 94 41.5
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 2.2e-08 63.2 94 41.5
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 2.8e-08 62.8 94 43.6
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 9.2e-07 57.8 113 38.1


User provided reference genes

Program Settings