Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.3e-280 969.1 509 100.0
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 4.3e-268 927.5 509 94.9
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 5.6e-268 927.2 526 93.7
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.4e-263 912.5 510 92.4
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 9.2e-263 909.8 511 92.4
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 1.6e-262 909.1 509 91.7
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.9e-262 907.1 510 93.1
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 7.8e-262 906.7 510 92.4
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 1.3e-261 906.0 510 92.2
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.5e-260 902.5 509 92.5
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 2.5e-260 901.7 510 91.6
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 1.6e-259 899.0 509 91.6
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.1e-259 898.7 510 90.8
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.8e-259 898.3 511 91.4
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.6e-259 897.9 509 91.6
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 6.2e-259 897.1 510 92.0
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 8.0e-259 896.7 510 91.6
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.4e-258 896.0 511 90.6
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 3.1e-258 894.8 509 91.4
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 90.6
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 4.0e-258 894.4 511 90.0
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 4.0e-258 894.4 511 90.4
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 4.0e-258 894.4 510 90.6
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 6.8e-258 893.6 510 90.2
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 8.9e-258 893.3 510 90.2
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 91.2
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.2e-257 892.9 511 90.2
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 90.6
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.5e-257 892.5 511 90.2
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 2.0e-257 892.1 511 90.8
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 2.6e-257 891.7 509 91.0
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 90.4
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 3.4e-257 891.3 510 90.2
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 5.8e-257 890.6 512 90.6
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 5.8e-257 890.6 511 90.8
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.7e-256 889.0 510 90.0
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 2.2e-256 888.6 509 90.0
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 2.9e-256 888.3 510 90.4
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 6.4e-256 887.1 509 89.8
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.1e-255 886.3 509 90.0
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 1.9e-255 885.6 510 89.6
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 2.4e-255 885.2 510 89.6
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 4.1e-255 884.4 510 90.6
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 5.4e-255 884.0 509 89.6
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 2.0e-254 882.1 510 88.8
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 2.0e-254 882.1 510 89.4
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 2.0e-254 882.1 510 89.6
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 3.5e-254 881.3 510 89.4
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 1.3e-253 879.4 510 88.6
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.3e-253 879.4 510 89.0
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 89.2
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 88.0
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.9e-253 877.9 510 89.2
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 3.9e-253 877.9 509 89.4
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 6.6e-253 877.1 510 89.4
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 6.6e-253 877.1 510 89.4
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 8.6e-253 876.7 510 88.0
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 8.6e-253 876.7 510 88.4
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 1.1e-252 876.3 509 89.0
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 88.4
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 88.4
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 2.5e-252 875.2 510 88.2
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 3.3e-252 874.8 510 88.8
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 87.6
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 89.0
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.2e-251 872.8 510 87.3
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.6e-251 872.5 510 88.0
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 4.7e-251 870.9 510 87.3
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 87.3
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.3e-250 868.6 511 87.3
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 6.8e-250 867.1 509 86.8
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 87.1
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 87.1
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.0e-249 865.5 510 86.9
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.6e-249 865.1 511 88.5
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.4e-249 864.8 510 87.1
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 86.7
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 4.4e-249 864.4 509 87.0
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 7.5e-249 863.6 549 83.8
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.7e-248 862.4 510 87.6
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.7e-248 861.3 511 87.5
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.9e-248 860.9 510 86.3
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 8.3e-248 860.1 510 86.7
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.1e-247 857.8 509 86.6
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 5.4e-247 857.4 512 87.7
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 7.1e-247 857.1 509 86.2
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 9.2e-247 856.7 510 86.3
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 1.2e-246 856.3 510 85.7
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 85.7
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 4.6e-246 854.4 510 85.7
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 7.8e-246 853.6 509 86.1
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 1.0e-245 853.2 510 85.5
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.7e-245 852.4 509 85.9
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.7e-245 852.4 509 85.9
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.7e-245 852.4 509 85.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.3e-245 852.0 499 88.8
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 1.1e-244 849.7 494 90.5
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 3.3e-244 848.2 509 84.5
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 4.3e-244 847.8 505 88.7
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 9.5e-244 846.7 511 86.3
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.2e-243 846.3 511 85.9
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.4e-242 842.8 524 84.2
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 1.4e-242 842.8 512 86.1
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 2.4e-242 842.0 510 84.9
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 4.0e-242 841.3 510 83.7
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 3.4e-241 838.2 493 88.6
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.7e-240 835.9 510 83.9
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 2.7e-238 828.6 510 83.5
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 2.7e-238 828.6 510 83.5
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 3.5e-238 828.2 510 83.3
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 4.6e-238 827.8 494 86.0
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 7.8e-238 827.0 510 83.3
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 8.7e-237 823.5 494 85.4
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 1.1e-236 823.2 492 86.0
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.9e-236 822.4 556 79.9
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.3e-236 821.6 493 85.8
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.1e-234 816.6 472 90.5
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.8e-232 808.1 510 80.8
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.1e-231 806.6 547 77.9
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 7.1e-231 803.9 512 83.4
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 7.8e-230 800.4 511 81.0
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 5.1e-229 797.7 509 82.1
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 8.7e-229 797.0 510 79.6
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.9e-228 795.8 524 81.5
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.9e-228 795.8 524 81.5
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 4.0e-226 788.1 509 81.3
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 5.3e-226 787.7 511 80.2
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 6.4e-224 780.8 511 79.6
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 5.1e-213 744.6 440 86.1
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 3.4e-209 731.9 472 84.1
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 3.5e-206 721.8 413 91.3
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 4.6e-206 721.5 511 76.5
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 1.6e-203 713.0 503 75.9
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.2e-198 696.8 510 74.3
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 1.3e-192 676.8 514 66.3
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.4e-188 661.0 503 69.2
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 8.5e-184 647.5 375 89.3
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.6e-180 636.0 468 72.4
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.3e-176 623.6 514 61.9
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 3.2e-175 619.0 364 89.0
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 7.5e-172 607.8 364 86.3
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 8.2e-171 604.4 522 61.1
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 9.4e-167 590.9 379 81.3
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 2.1e-166 589.7 511 59.3
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 5.7e-164 581.6 504 65.9
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.7e-161 572.8 494 58.7
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 5.5e-159 565.1 346 84.7
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 6.1e-158 561.6 325 90.8
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 7.5e-156 554.7 456 70.2
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 7.8e-153 544.7 499 54.9
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 1.5e-151 540.4 307 92.8
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-142 510.4 284 94.0
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 5.4e-130 468.8 383 61.9
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.6e-124 449.9 254 90.2
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.8e-117 427.2 515 48.0
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 8.4e-115 418.3 245 89.8
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 8.4e-107 391.7 485 44.5
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.3e-104 384.4 279 73.8
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.7e-102 376.3 386 53.6
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 3.0e-96 356.7 520 38.8
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 5.9e-84 315.8 199 85.4
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 1.4e-69 268.1 502 39.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.3e-69 266.2 343 46.1
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 2.0e-60 237.7 142 86.6
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.2e-56 223.0 288 45.1
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 7.5e-55 219.2 367 40.9
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 4.7e-49 199.9 117 82.9
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.3e-46 189.1 206 52.9
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.1e-45 188.7 164 68.3
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.8e-43 180.3 197 52.8
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.3e-35 154.5 106 75.5
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.4e-31 140.6 119 58.8
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.6e-28 131.7 82 84.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 1.7e-22 111.7 156 48.1
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 8.6e-11 72.8 63 58.7
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-08 65.9 37 83.8
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 3.8e-06 57.4 38 73.7


User provided reference genes

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