Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 0.0e+00 1659.8 879 100.0
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 0.0e+00 1407.9 783 96.0
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 0.0e+00 1406.0 783 95.9
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 0.0e+00 1208.0 850 77.6
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1204.1 897 73.2
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1197.2 895 73.5
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1196.4 898 74.8
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 0.0e+00 1187.9 898 73.4
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 0.0e+00 1186.8 896 74.4
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1184.9 895 72.0
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1182.2 896 72.7
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 0.0e+00 1179.1 894 73.9
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 0.0e+00 1178.7 862 76.1
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 0.0e+00 1176.0 888 74.3
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1165.2 897 71.0
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1164.8 897 70.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 0.0e+00 1158.3 894 71.0
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1155.6 898 72.2
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 0.0e+00 1153.7 897 73.4
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1153.3 897 73.5
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 0.0e+00 1115.9 895 69.7
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 0.0e+00 1114.4 890 70.9
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1104.7 903 68.8
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1104.7 898 67.6
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1103.6 903 68.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 0.0e+00 1083.2 899 69.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1079.3 897 69.8
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 0.0e+00 1075.5 894 68.5
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.2e-311 1073.2 897 67.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.6e-310 1067.8 895 69.5
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 7.8e-310 1067.0 903 67.6
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 1.5e-308 1062.8 892 66.4
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 3.3e-308 1061.6 892 68.3
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 5.6e-308 1060.8 894 68.8
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.0e-306 1056.6 891 69.1
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.2e-305 1053.1 898 66.5
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 3.4e-305 1051.6 886 66.1
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 7.5e-305 1050.4 907 64.7
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.7e-304 1049.3 901 65.8
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 2.2e-304 1048.9 892 65.7
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 1.6e-302 1042.7 909 68.1
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.7e-302 1042.0 909 68.1
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.0e-301 1040.0 904 65.3
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 5.0e-301 1037.7 898 66.4
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 4.7e-299 1031.2 905 65.2
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 6.2e-299 1030.8 896 67.5
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 3.1e-298 1028.5 891 67.2
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.2e-297 1026.5 891 67.7
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-297 1026.2 904 65.0
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 4.4e-297 1024.6 905 66.2
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 9.8e-297 1023.5 900 64.1
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.3e-296 1023.1 904 64.8
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 2.2e-296 1022.3 800 72.8
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 3.7e-296 1021.5 905 64.8
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.9e-296 1021.1 900 64.0
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 4.9e-296 1021.1 879 65.9
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 4.1e-295 1018.1 906 65.8
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 1.6e-294 1016.1 891 66.1
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 7.8e-294 1013.8 885 66.9
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.5e-292 1009.6 885 66.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.5e-292 1008.8 886 67.0
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 5.6e-292 1007.7 885 66.6
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.2e-291 1004.2 897 66.3
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 6.8e-290 1000.7 891 65.9
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.3e-288 996.5 887 63.6
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 6.4e-288 994.2 889 64.8
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 3.2e-287 991.9 898 64.8
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.7e-286 988.8 891 66.4
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.1e-284 983.4 861 66.3
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 3.3e-284 981.9 889 62.1
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.2e-281 973.4 781 70.3
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.5e-281 973.0 882 63.6
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.6e-281 972.2 890 64.0
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 4.9e-280 968.0 852 66.5
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 8.4e-280 967.2 895 62.5
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 5.4e-279 964.5 881 63.1
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 2.3e-277 959.1 889 63.2
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.5e-273 946.4 900 60.2
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 5.8e-273 944.5 892 64.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 7.6e-273 944.1 898 60.4
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 3.2e-271 938.7 909 60.5
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 7.1e-271 937.6 895 65.4
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 5.6e-268 927.9 853 64.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 5.3e-266 921.4 861 63.8
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 2.4e-263 912.5 898 59.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 6.0e-262 907.9 894 59.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.6e-259 899.8 893 60.4
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.7e-256 889.8 905 58.7
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 8.2e-251 870.9 899 58.7
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 7.6e-249 864.4 891 59.8
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.8e-245 853.2 852 60.4
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 3.7e-243 845.5 894 59.8
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 4.1e-242 842.0 883 58.6
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.9e-240 835.9 893 56.8
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.8e-240 835.5 768 62.2
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 8.5e-240 834.3 899 60.0
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 2.7e-238 829.3 898 55.8
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 2.8e-235 819.3 852 58.2
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 6.9e-234 814.7 865 58.4
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 5.9e-233 811.6 900 53.6
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 3.8e-232 808.9 879 58.0
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.4e-229 800.4 879 58.9
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 3.0e-229 799.3 879 58.8
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 4.4e-228 795.4 888 57.3
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.8e-227 792.0 861 56.7
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 1.1e-226 790.8 888 56.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 7.7e-225 784.6 889 55.5
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 1.0e-224 784.3 843 58.8
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.7e-224 783.5 889 54.3
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 3.8e-224 782.3 892 56.4
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.8e-224 782.3 864 59.8
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 5.5e-223 778.5 897 54.3
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 2.1e-222 776.5 725 64.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.6e-222 775.8 897 55.1
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.1e-218 762.3 873 56.4
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.7e-216 756.9 846 57.3
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 8.5e-216 754.6 842 56.4
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.6e-214 749.2 898 53.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 8.8e-213 744.6 842 53.2
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 1.5e-212 743.8 899 52.9
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-212 743.8 843 53.3
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.7e-211 739.2 875 53.8
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 6.3e-211 738.4 874 55.0
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.6e-209 733.8 840 55.8
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 7.2e-207 724.9 798 57.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 2.7e-206 723.0 748 60.4
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 4.9e-203 712.2 752 60.1
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 5.0e-200 702.2 867 53.2
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.5e-199 700.7 908 53.9
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.2e-198 697.6 906 54.0
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.4e-197 694.1 922 50.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.7e-195 687.2 871 53.2
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 1.2e-193 681.0 871 52.7
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 7.8e-193 678.3 871 52.5
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.7e-192 677.2 853 52.9
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.6e-190 670.6 857 52.6
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 4.7e-190 669.1 886 51.5
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.4e-189 667.5 884 51.8
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 5.8e-188 662.1 906 51.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.6e-182 644.0 905 48.3
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.1e-182 643.7 763 52.9
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 6.2e-182 642.1 906 50.2
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 5.2e-181 639.0 909 49.9
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.2e-177 627.9 858 49.1
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 3.0e-176 623.2 836 52.0
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.7e-168 597.4 834 49.2
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 6.6e-160 568.9 739 52.0
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 2.1e-158 563.9 880 48.3
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.3e-143 513.5 894 43.3
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 4.3e-135 486.5 451 64.1
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.1e-133 481.9 634 55.0
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 4.1e-133 479.9 737 47.5
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 3.8e-131 473.4 872 42.3
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.3e-126 458.4 816 44.1
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.0e-120 438.7 919 40.4
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 6.7e-120 436.0 915 42.1
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 2.2e-118 431.0 922 41.1
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.2e-113 415.2 356 69.4
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 6.1e-113 412.9 919 41.5
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.8e-112 411.4 919 41.6
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 9.1e-109 399.1 892 38.0
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 7.7e-108 396.0 898 37.4
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.6e-103 380.9 867 39.1
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 5.0e-99 366.7 262 93.9
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 2.7e-92 344.4 304 59.9
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 7.3e-82 309.7 933 32.9
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.1e-81 308.1 1003 33.9
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 6.8e-72 276.6 373 47.7
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 4.3e-66 257.3 379 46.7
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 9.5e-66 256.1 501 39.9
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.1e-64 252.7 426 44.6
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 3.1e-64 251.1 359 46.2
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.9e-64 249.6 296 49.3
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.9e-61 241.9 297 49.5
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 5.8e-55 220.3 255 50.6
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.2e-54 218.4 320 45.0
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 5.4e-53 213.8 335 41.2
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.4e-45 188.3 292 42.1
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.1e-45 186.8 175 53.7
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.8e-41 174.1 782 27.4
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.2e-39 169.5 97 90.7
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 8.4e-38 163.3 179 54.7
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.5e-21 108.6 168 41.7
SEGI_26240 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.0e-11 75.1 294 26.5


User provided reference genes

Program Settings